Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq103 111 2e-19 >seq103 Length=1149457 Score = 111 bits (122), Expect = 2e-19 Identities = 401/619 (65%), Gaps = 19/619 (3%) Strand=Plus/Plus Query 116591 GAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTAC 116650 |||||| || |||||||| | ||||| || || | || || |||| ||| Sbjct 422575 GAGAACAAACGTAGGTTCGTGCTCTTCCCTATCAGGTATCATGAGATTTGGCAGGCCTAC 422634 Query 116651 AAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGC 116710 |||| ||| ||||| || |||||||| | |||||| | |||||||| || || | | Sbjct 422635 AAAAGGGCGGAGGCATCTTTCTGGACTGCAGAGGAGATTGACCTGTCGAAAGATATAAAT 422694 Query 116711 GACTGGGAGC---GCTTGAACGACAACGAGCGCCATTTCAT--CAAGCACGTGCTGGCCT 116765 || ||||| | ||| || |||| | || || | || || || || | Sbjct 422695 GATTGGGAAAATAGGATGACAGAAGGCGAGAGATTCTTTATGTCTAGA--GTCCTAGCTT 422752 Query 116766 TTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGG 116825 | || || || ||||| || ||||| |||||| | || ||| ||| | |||| Sbjct 422753 TCTTTGCGGCATCTGACGGAATTGTCAATGAGAATTTAGTTGAGAATTTTTCCGCAGAGG 422812 Query 116826 TGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACT 116885 | ||| | | ||||| || |||||||| || |||||| ||||| || | || | Sbjct 422813 TTCAGATACCAGAGGCCAAATGTTTCTACGGGTTCCAGATCATGATGGAAAATATCCATT 422872 Query 116886 CGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGA---GAAGCTCC 116942 |||| | || || | ||||| || ||| | | | |||| | | || Sbjct 422873 CGGAGACTTACTCATTATTAATCGAGACATACATCAAGGATCCTAAGGAACGGGATTTC- 422931 Query 116943 GTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGC 117002 ||||| || || || ||| || || |||| || ||||| |||||||| | Sbjct 422932 --TTGTTTAATGCGATTGAGCACATCCCTCAGATCAAGGAAAAGGCTGAGTGGGCTATCA 422989 Query 117003 GCTGGATCGCCGGCAGAGAGGCCGCCTTCGGC-GAGCGCCTGGTGGCCTTCGCGGCCGTC 117061 | ||||| | | || | | | || || ||| | |||||||| || || || || Sbjct 422990 GGTGGATT-CAAGATGACAATGCTCTTTACGCTGAGAGGCTGGTGGCATTTGCCGCAGTA 423048 Query 117062 GAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTC 117121 || || |||| || ||||| ||| |||||||| ||||||||||| || |||||| Sbjct 423049 GAAGGTATCTTTTTCTCGGGATCTTTTGCCGCCATCTTTTGGCTCAAAAAGAAGGGCCTC 423108 Query 117122 ATGCCCGGCCTGAC--TTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCG 117179 ||||| |||||||| ||||| |||||| | |||| || || || || |||| | Sbjct 423109 ATGCCAGGCCTGACCTTTTCA--AACGAGTTAATCTGTAGAGATGAAGGATTGCACACAG 423166 Query 117180 ACTTTGCCTGTTTGCTGTT 117198 ||||||| ||| | |||| Sbjct 423167 ACTTTGCTTGTCTAATGTT 423185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218523774800