Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq70 154 2e-32 seq40 98.7 2e-15 >seq70 Length=181133 Score = 154 bits (170), Expect = 2e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| |||||| | ||||| || || || || ||||| || | ||| ||||| | | Sbjct 22715 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 22656 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || || |||| ||| || ||||||||||||||||| |||||||| ||| Sbjct 22655 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 22596 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | || |||||||| || || | |||||| | |||| || || ||||| Sbjct 22595 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22536 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||||| |||||||||||| ||||||| | || |||||||||| Sbjct 22535 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGGTAT 22486 Score = 145 bits (160), Expect = 1e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || ||| | || ||||| ||||| || ||||| | || | | Sbjct 22943 ATGCAGATTTTTGTTAAAACATTGACCGGCAAGACTATTACATTAGAGGTGGAGTCTTCT 22884 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || || |||| ||| || ||||||||||||||||| |||||||| ||| Sbjct 22883 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 22824 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | || |||||||| || || | |||||| | |||| || || ||||| Sbjct 22823 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22764 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||||| |||||||||||| ||||||| | || |||||||||| Sbjct 22763 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGGTAT 22714 Score = 140 bits (154), Expect = 5e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || || || ||||| || | ||| ||||| | | Sbjct 22487 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 22428 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || || |||| ||| || || |||||||||||||| |||||||| ||| Sbjct 22427 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 22368 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | || |||||||| || || | |||||| | |||| || || ||||| Sbjct 22367 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22308 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||||| ||||| |||||| ||||||| | || |||||||||| Sbjct 22307 ATTCAAAAAGAGTCAACATTGCATCTGGTTTTGAGACTAAGAGGTGGTAT 22258 Score = 127 bits (140), Expect = 3e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || || || ||||| || | ||| | ||| | | Sbjct 23171 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTCGAATCCTCT 23112 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || || |||| ||| || || ||||||||||| || ||||||||||| Sbjct 23111 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGCATCCCACCTGATCAG 23052 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | || || ||||| || || || |||||| | |||| ||| ||||| ||| Sbjct 23051 CAAAGATTGATCTTCGCAGGTAAGCAGTTGGAGGATGGCAGAACTTTATCTGATTACAAT 22992 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| ||||||||| | || | ||||| | ||| |||||||||| Sbjct 22991 ATCCAAAAGGAATCAACTCTACACCTCGTTTTGAGATTAAGAGGTGGTAT 22942 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || || || ||||| || | || ||||| | | Sbjct 22259 ATGCAGATTTTTGTTAAGACTCTTACCGGTAAGACTATTACACTCGAAGTTGAATCCTCT 22200 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | ||| || ||||| || || || || || || || || ||| Sbjct 22199 GATACCATTGACAATGTCAAATCCAAGATTCAGGACAAGGAGGGCATTCCGCCCGACCAA 22140 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || | || |||||||| || ||| | |||||| | |||| | || || || Sbjct 22139 CAGAGATTGATCTTTGCAGGTAAGCAACTGGAGGATGGAAGAACTCTTTCTGACTACAAC 22080 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 ||||||||||| || || | ||| | || || | ||| |||||||| Sbjct 22079 ATTCAAAAAGAGTCGACCCTACATCTTGTGCTAAGATTAAGAGGTGGT 22032 >seq40 Length=692676 Score = 98.7 bits (108), Expect = 2e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || |||||||| || |||||||| ||||||||||| || || | || ||||| || || Sbjct 222279 AAGATTCAAGACAAGGAAGGTATTCCACCTGATCAGCAGAGATTGATCTTTGCTGGTAAG 222338 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 ||||| |||||| | |||| || || ||||| ||||| || ||||| || ||||| Sbjct 222339 CAATTGGAGGATGGCAGAACCTTGTCTGACTATAACATTCAGAAGGAATCTACCTTGCAC 222398 Query 124743 TTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 ||||| | | || |||||||| ||| || Sbjct 222399 TTGGTGCTTAGATTGAGAGGTGGTGGTAAGAA 222430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755455008464000