Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq40 95.1 1e-14 seq34 87.8 1e-12 >seq40 Length=692676 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||||||| | |||||||||| || |||||||||||||| ||||| | Sbjct 222421 CCACCTCTCAATCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGAC 222362 Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 | ||| | | || |||| ||| || || || || ||||| | ||| || || || | Sbjct 222361 AAGGTT--CTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTG 222304 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | ||| |||||||| ||| ||| ||| || | | |||| | ||| | Sbjct 222303 GAATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGA 222244 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 | || | |||||| ||||| ||||||| ||||| || || || ||||| ||| Sbjct 222243 CTTCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCATCTTG 222191 >seq34 Length=390617 Score = 87.8 bits (96), Expect = 1e-12 Identities = 102/136 (75%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||||||| || |||||||||| ||| ||||| || ||||||||||| | Sbjct 329523 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 329582 Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 |||| | | || |||| || || || ||||| ||||| | ||| ||||| || | Sbjct 329583 AAAGTT--CTGCCATCCTCCAACTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTG 329640 Query 45228 GCACACCCTCCTTGTC 45243 | | |||||||||||| Sbjct 329641 GAATACCCTCCTTGTC 329656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074694427205