Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq66 109 7e-19 >seq66 Length=195892 Score = 109 bits (120), Expect = 7e-19 Identities = 246/356 (69%), Gaps = 18/356 (5%) Strand=Plus/Plus Query 104403 TGATTTAGGACCTATTTATGGTTTTCAGTGGAGACATTATGGTGAAAATTATA----TTG 104458 |||||||||||| ||||||| || || |||||||| | |||| ||| || | ||| Sbjct 89498 TGATTTAGGACCCGTTTATGGGTTCCAATGGAGACACTTCGGTGCAAAATACAAGACTTG 89557 Query 104459 GGTG--CGATAATAAATATGGTGGTATAGATCAACTCAAAAATATTATTACAACAATTCA 104516 | |||| ||| | |||| | |||||||| || || | ||| || |||| | Sbjct 89558 TGACGACGATTATACAGGGCATGGTTTTGATCAACTGCAAGATGTGATT-CACAAATTGA 89616 Query 104517 AAATGAA-CCTTGGGATAGAAGAATGATATTATTAGC--TTGGAACCCAAAGGATAATTC 104573 ||| ||| |||| ||||| |||| |||||| ||| |||||| ||| ||| | | Sbjct 89617 AAACGAATCCTTATGATAGGCGAAT--TATTATGAGCGCTTGGAATCCACCAGATTTTCC 89674 Query 104574 TAAAATGGCACTTCCTCCTTGTCAT-TGTATAGCACATTTTGATGTAAG-TTCAAAAATA 104631 |||||| | || || || ||| ||| | |||| ||| |||| || ||| ||| Sbjct 89675 GCTCATGGCATTGCCGCCATGCCATGTGTTTT-CACAATTTTATGTTAGCTTCCCAAAGG 89733 Query 104632 AATGGTAAAAGAGAATTGTCTTGTCATTTATTTCAAAGATC-TGCAGATATGGGGTTGGG 104690 || || ||| | || | || || |||| ||||||||| ||| || ||||| | || Sbjct 89734 AAGGG-AAACCAAAACTTTCATGCTTGTTATATCAAAGATCATGC-GACATGGGACTAGG 89791 Query 104691 AGTTCCTTTTAACATAGCAAGTTATGCATTATTAACACATATAATAGCTCATGTCT 104746 || || ||||| || ||| ||| || ||||| || | || ||||||||||||| Sbjct 89792 CGTCCCATTTAATATTGCATCTTACGCTTTATTGACCCGAATGATAGCTCATGTCT 89847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679813507743600