Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq47 187 2e-42 seq36 116 3e-21 seq70 96.9 3e-15 seq40 91.5 1e-13 >seq47 Length=438083 Score = 187 bits (206), Expect = 2e-42 Identities = 627/965 (65%), Gaps = 12/965 (1%) Strand=Plus/Plus Query 23021 GCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCG 23080 || || || || |||||||| || || || || || | ||| || |||||||| Sbjct 245434 GCAATAGAAGCCAGATTGCAAACTGCAGATTCATCCTTATCGGAGTATTCAACAATTTCA 245493 Query 23081 GTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCAC 23140 ||| |||||| | || ||| |||| || | ||||| || ||| |||||| Sbjct 245494 CAACAAAGATTGGATGATTTAATCACACCCAGGTTCTTTTGGTTACTCTTTTCATTGCAA 245553 Query 23141 GAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGC 23200 | ||||||||| | ||| | || || || || || ||| | |||| ||| || | Sbjct 245554 GCATCCTTGTATAACATAAAAGGTGTACCAGTTTCTGTCTGAGCTTCGAGGATGGCGTAC 245613 Query 23201 CACATAGTCTGAGCGTGAACACGTCGCACGTACCTG--CCTTCTTCCTCGTACTTTTGGT 23258 |||| ||||||| | ||| | |||| ||||||| ||| || ||| | Sbjct 245614 CACAACTTCTGAGCCCTTATT-GTCTTTC-TACCACGCCCTTCTTGCTCATATCTTTCAT 245671 Query 23259 ACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACA 23318 | | ||| ||||| || |||||| || | | || |||| || | || | | Sbjct 245672 ATAGCGCTTCAAACTCTTTCCCGTAAACATCAGATAAACCTGGCGCTTCGCTAGGGGAGA 245731 Query 23319 TGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAG 23378 || |||| | || | ||| || || ||||||| | || | ||||||| | Sbjct 245732 AAAGGGTCCATTCTCCGTTCTGTTCTACACGCTTCATAAATAAGTCGGAAATCCATAACG 245791 Query 23379 CGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAAT--CCAA 23436 | |||| || | |||||| | |||||| || ||| || | |||| | ||| | | Sbjct 245792 CTGGAAACAAATCTCTGGCGCGAATCTCCTCCTTACCG-TGAT-TTTTCCTAATGTCGAT 245849 Query 23437 AAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTT 23496 ||| || || | || || ||||| ||||| | || | |||||| ||||| ||||| || Sbjct 245850 AAAATCAAAAATATCAGCGTGCCAGGGCTCCAAATATAGGGCAAAAGCGCCAGGTCTTTT 245909 Query 23497 ATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAG 23556 ||| || || || || || || || || || || || | || | | ||| || | || Sbjct 245910 ATTACCACCTTGGTCCACATACCGAGCAGTATTATTAAAAACACGAATCATGGGGATTAG 245969 Query 23557 ACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAAC 23616 || || || | ||| || || | | |||||| ||| || | ||||| | Sbjct 245970 TCCATTAGATGTACCGTTGGTACCAGCAATATACGAACCAGTTGAACGGATATTGTGGAT 246029 Query 23617 GTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTA 23676 || ||||| || || || | | || || ||||| || |||| ||| |||||||| || Sbjct 246030 ATGCAAACCAATACCACCAGCAGTCTTGGAGATCATAGCACATTCTTTTAGAGTGTCATA 246089 Query 23677 GATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTT 23736 ||| |||||||| ||| ||||| | || |||| ||| || |||| ||| || | | Sbjct 246090 GATACCCTCGATAGAGTCATCTTTCATGGCTACCAGGAAGCAAGAAGCCATCTGAGGATG 246149 Query 23737 GGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAG 23796 || || | || ||| || || ||| ||||| | || || | |||||||| Sbjct 246150 TGGGGTTCCTGCATTGAATAGCGTAGGGGAAGCGTGGATGAAATACCTTAGAGACATTAG 246209 Query 23797 ATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCAT 23856 ||||| || || || || || | ||| || || ||||| || || | | || | ||| Sbjct 246210 GTTGTAAGTCTCAATAGCTGCCTTAATATCATCACCGTGAATGCCAAGCGAAACTCTCAT 246269 Query 23857 CATCATGTATTGAGGTCTCTCGACCG--TGACGCCGTTAATTTTGAACAGATATGAACGT 23914 || | | |||||||||||| | || ||| || |||||||| | || ||||||||| Sbjct 246270 TATTAAATGTTGAGGTCTCTC-AGCGACTGA-ACCATTAATTTTAAGCAAGTATGAACGT 246327 Query 23915 TGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAA 23974 | || || || || || || || | | | || || | ||||| || || |||||| Sbjct 246328 TCCAAAGTCTTGAAACCGAAGTAATTGAACTGGAAATCTCTATCGTAGACAATCGCCGAA 246387 Query 23975 TTCAA 23979 ||||| Sbjct 246388 TTCAA 246392 >seq36 Length=192470 Score = 116 bits (128), Expect = 3e-21 Identities = 360/546 (66%), Gaps = 11/546 (2%) Strand=Plus/Minus Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086 || || | |||||| || || ||| | || || |||||||||| ||||| ||| Sbjct 95727 GATGCTAAATTGCAAACAGCTGTCTCATTTTCAGAACTGTACTCTACTATTTCACAACAG 95668 Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGA-TTGCACGAATC 23145 || ||| | || |||||||| ||||| | ||||| | ||| || ||||| ||| Sbjct 95667 AGGTTGGAGGATTTGATCGTGCCTAAATTTTTTTGGTT-CGATTTAGAGTTGCAAACATC 95609 Query 23146 CTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACAT 23205 ||||||||||||| | ||| || ||||| ||||| | | || || ||| | Sbjct 95608 CTTGTAGAGCATGAAAGGCCCTCCTGTCTCTACCTGACTTTGCAGTATTTCTGACCATAG 95549 Query 23206 AGTCTGAGCGTGAACACG--TCGCACGTAC--CTGCCTTCTTCCTCGTACTTTTGGTACA 23261 |||| || | | || | || ||| ||| | | || || |||| |||| Sbjct 95548 TTTCTGGGCTTTGATTCGCTTTACAGGTAATTCTGGAGTGGTT-TCATATTTTTCATACA 95490 Query 23262 ACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATC-GGACACATG 23320 | | |||||||| | || ||| ||| | || |||| || |||| |||| | Sbjct 95489 ATTCTTCAAATTCCTCCCCATAAACATCGTTTAACCCTGGCGCTT-CATCTGGACTGAAT 95431 Query 23321 AGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCG 23380 | || ||| | || || || | |||| || | || || ||||||| ||| Sbjct 95430 AAACACCATTCTCCGTTGGATTGCACCCTCTTCATGAATAAGTCTGGAATCCATAAAGC- 95372 Query 23381 TAGAAC-AGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAA 23439 ||||| | || | || | | ||||||||| ||| ||| ||| | | | |||||| Sbjct 95371 TAGAAATAAATCTCTAGCCCTGAGCTCCTCTTTTCCGTGGTTTTTTCTGAGTTGCAAAAA 95312 Query 23440 GTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATT 23499 ||| || || || | |||||| ||||| | ||||| | | | || |||||||| ||||| Sbjct 95311 GTCGAAGACATCTGAATGCCAGGGCTCCAAGTAAATGCAATAGGCTCCCGGTCTTTTATT 95252 Query 23500 GCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACC 23559 || || |||||||| || | ||||||||||||| | || | ||||| || || | || Sbjct 95251 ACCTCCTTGATCGACATATCTGGCCGTGTTGTTGAAAACACGAAGCATAGGAACTAATCC 95192 Query 23560 GTTGGA 23565 ||||| Sbjct 95191 ATTGGA 95186 >seq70 Length=181133 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || |||||||| || || || || || || |||| |||||| | || Sbjct 22259 ATGCAGATTTTTGTTAAGACTCTTACCGGTAAGACTATTACACTCGAAGTTGAATCCTCT 22200 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | |||||| | || ||||||||| ||| | ||||||||||| Sbjct 22199 GATACCATTGACAATGTCAAATCCAAGATTCAGGACAAGGAGGGCATTCCGCCCGACCAA 22140 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || || || || || |||| || | ||| | || || ||| Sbjct 22139 CAGAGATTGATCTTTGCAGGTAAGCAACTGGAGGATGGAAGAACTCTTTCTGACTACAAC 22080 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||||||||| ||||| || ||||| || || ||| | || || ||| Sbjct 22079 ATTCAAAAAGAGTCGACCCTACATCTTGTGCTAAGATTAAGAGGTGGT 22032 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || |||||||| || || || || || || | || |||||| | || Sbjct 22487 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 22428 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | || || || || ||| || ||||| | || || ||||| Sbjct 22427 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 22368 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || || || || || ||| |||| || | ||| | || |||||| Sbjct 22367 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22308 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||||||||| || || | |||||||| | ||||| || || |||| Sbjct 22307 ATTCAAAAAGAGTCAACATTGCATCTGGTTTTGAGACTAAGAGGTGGTA 22259 >seq40 Length=692676 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| ||||| |||| || || || || ||| | || || || | Sbjct 222192 AAGATGCAGATTTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTTGAAGTCGAGTCT 222251 Query 31250 TCCGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || |||| | |||| | ||||| || ||| | | |||||||||| | || || || Sbjct 222252 TCTGACACTATCGACAATGTCAAGTCAAAGATTCAAG-ACAAGGAAGGTATTCCACCTGA 222310 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||| | | || || ||||| || || ||||| || | || || || || Sbjct 222311 TCAGCAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTA 222370 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||||||| || ||||| || | || |||| |||||| |||| || ||| Sbjct 222371 TAACATTCAGAAGGAATCTACCTTGCACTTGGTGCTTAGATTGAGAGGTGGT 222422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765814931600