Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq47 269 3e-67 seq103 223 4e-53 >seq47 Length=438083 Score = 269 bits (298), Expect = 3e-67 Identities = 1456/2299 (63%), Gaps = 70/2299 (3%) Strand=Plus/Plus Query 62042 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 62100 |||| |||||||| |||| || ||||| | | ||| | | |||||||| || || | Sbjct 244511 CAATAGTGAATTGGATGGCTGCAGATGCTGCCTGCGTCCTCAAGTAGTACATACCTGTCT 244570 Query 62101 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 62160 | || || |||| |||||||| |||||||| |||||||| | ||| | Sbjct 244571 TCAGGCCCTTTTTCCAACCGTAAAAGTGCATACTTGTTAGTTTACCCATGGTTGGAGCGC 244630 Query 62161 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 62220 ||||| || |||| || || ||||| ||||| || | | ||| || ||||| | Sbjct 244631 GCATATGAATGTTCAACGAGTGGGACTGATCAATGAATGCAGCGCGGTCCGCGGCCATAT 244690 Query 62221 TTATGATC-GTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTC 62278 || || |||| | | | ||||||||| | ||| || || || || || | |||| Sbjct 244691 CGATAATATGTCTCTGG-GAAATTTCCCATACAGTCTTGTATAAATCT-TTCAGCTCTTG 244748 Query 62279 TGGAAGGTTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGAT-CT 62334 |||| ||||| |||| |||||||||||| || || || | ||| || || Sbjct 244749 AGGAACGTTTGGAATATTTTGAATGGATCCATTGTCAGTAATGATTTGTTGCTTCATGCT 244808 Query 62335 CATCATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGG 62393 | |||| ||| |||| | ||| ||| | | || | || ||| || || | ||| Sbjct 244809 C-TCATCCCA-AATTCCCAGATCGACCAAATCACGTAGTAAATACGGATTCACAATTTGA 244866 Query 62394 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCA 62453 ||||| ||||| | || | |||| || ||||| || || || || | | ||| Sbjct 244867 AATTCACCAGAAAGCACACGACGAGAATACATATTGGACGTGTAAGGCTCGAAGCATTCA 244926 Query 62454 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 62513 || | ||||| || || | ||| || ||||| |||||||| || || | || || Sbjct 244927 TTGTAGCCCAAGATCTGGGAAGTAGAAGCAGTAGGCATAGGGGCAACAAGCAAGGAGTTA 244986 Query 62514 CTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGT 62573 | | ||||| || ||| || | | | | ||||||| ||| || || || || Sbjct 244987 CGCACACCGTGTGCCTTGAGATTCTGCCTCAAAGTATCCCAATCCCATAGTTCAGAAGG- 245045 Query 62574 ACAACANNNNNNNNNNNATATTGTAG---AATA-CCGTTAC--TGGCGTACGATCCTACA 62627 | | || | | |||| || || | | | | ||||| || Sbjct 245046 ----CTTTTTGTCCCATAGATCGAATTGCAATAACCCTTGCGATATGGGA-GATCCCTCA 245100 Query 62628 TATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAA 62687 || || ||||| | || | ||||| | ||| | || || ||||| ||||| | Sbjct 245101 TAAGTCTCATAAGTACCATGCTTCTGTGATAGCTCGCATGAAGCTTCTAAAGCACCATGG 245160 Query 62688 TAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAA 62747 ||||| |||||||| || | || ||||| | ||||||| || ||||| || Sbjct 245161 TAAATCGTTTCAAATATTTGCTGGTTTAGCGTTCTCGCTTCCGCAGATTCGAATGGTAAA 245220 Query 62748 TTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62807 || | ||||| | ||| ||||| || | || || | | | || || ||||||||| Sbjct 245221 CGCAACATCATAAAAGTGTCAGCTAACCCATTGACCCCTAGAGCAATTGGCCTATGTCTC 245280 Query 62808 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62867 | || || ||| ||| || || | ||||||||| ||| || |||||||| || | | Sbjct 245281 ATGTTGGATTTTTTAGCCTCAGGGACAGGATAATAGTTACGGTCAATAATTTTGTTCAAA 245340 Query 62868 TTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAA---TCAAATCGC------ 62918 || | ||| | ||| | || || | || ||| ||| | || | Sbjct 245341 TTACGTGTAATGGCCTTGGCAACCTCATGCAACTTGGCAAAGCTGTACCATTGTTCTTTA 245400 Query 62919 CCATCTATT---------ACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCT 62969 |||||| | ||| | | | |||| ||| |||||||| || || || Sbjct 245401 CCATCTTTCGACACCTCGACACAAGAGGGAAGCGCAATAGAAGCCAGATTGCAAACTGCA 245460 Query 62970 ACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTT 63029 |||| ||| | |||| | || ||| |||||||| | || || Sbjct 245461 GATTCATCCTTATCGGAGTATTCAACAATTTCACAACAAAGATTGGATGATTTAATCACA 245520 Query 63030 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTA 63089 || | || | ||| |||||||||| || || |||||||| || | || || || ||| Sbjct 245521 CCCAGGTTCTTTTGGTTACTCTTTTCATTGCAAGCATCCTTGTATAACATAAAAGGTGTA 245580 Query 63090 CCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGA 63148 |||||||| |||||| ||| | || || | ||| | | || ||||| ||||| | Sbjct 245581 CCAGTTTCTGTCTGAGCTTCGAGGATGGCGTACCACAACTTCT-GAGCCCTTATTGTC-- 245637 Query 63149 TTTGTATCTC--CTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAA 63206 ||| || | | | |||| || ||| ||| | ||| ||||| | || || Sbjct 245638 TTTCTACCACGCCCTTCTTGCTCATATCTTTCATATAGCGCTTCAAACTCTTTCCCGTAA 245697 Query 63207 ACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC 63266 |||| || | || ||| || | | | | ||| ||||||| | | Sbjct 245698 ACATCAGATAAACCTGGCGCTTCGCTAGGGGAGAAAAGGGTCCATTCTCCGTTCTGTTCT 245757 Query 63267 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGT 63326 || || |||||||| | || | |||||| | ||| ||| | |||||| | | | Sbjct 245758 ACACGCTTCATAAATAAGTCGGAAATCCATAACGCTGGAAACAAATCTCTGGCGCGAATC 245817 Query 63327 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63386 ||||| || || ||| || ||| |||| || | | |||||||| ||||| || Sbjct 245818 TCCTCCTTACCGTGATTTTTCCTAATGTCGATAAAATCAAAAATATCAGCGTGCCAGGGC 245877 Query 63387 TCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 63446 ||||| |||| ||| | | | ||||| | ||| || || || || || | || | ||| Sbjct 245878 TCCAAATATAGGGCAAAAGCGCCAGGTCTTTTATTACCACCTTGGTCCACATACCGAGCA 245937 Query 63447 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAG 63506 || |||||| |||| | | ||| || || | || || ||| |||| |||||||| | Sbjct 245938 GTATTATTAAAAACACGAATCATGGGGATTAGTCCATTAGATGTACCGTTGGTACCAGCA 245997 Query 63507 ATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 63566 ||||| ||| | | ||| ||||| || | ||| || || || || | || Sbjct 245998 ATATACGAACCAGTTGAACGGATATTGTGGATATGCAAACCAATACCACCAGCAGTCTTG 246057 Query 63567 GAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATG 63626 ||||| | || ||| ||||| ||||||||||| || || || ||||| ||||| Sbjct 246058 GAGATCATAGCACATTCTTTTAGAGTGTCATAGATACCCTCGATAGAGTCATCTTTCATG 246117 Query 63627 TTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGA 63686 | || || || || ||| || || | | ||||| ||||| |||| ||||| Sbjct 246118 GCTACCAGGAAGCAAGAAGCCATCTGAGGATGTGGGGTTCCTGCATTGAATAGCGTAGGG 246177 Query 63687 GAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATA 63746 |||||||| | || | || ||| | ||| ||||| ||||||||||||| | ||| Sbjct 246178 GAAGCGTGGATGAAATACCTTAGAGACATTAGGTTGTAAGTCTCAATAGCTGCCTTAATA 246237 Query 63747 TC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAAT 63805 || || | ||||| || | | || | ||||| | || |||||||| ||| | | Sbjct 246238 TCATCACCG-TGAATGCCAAGCGAAACTCTCATTATTAAATGTTGAGGTCTCTCAGCGAC 246296 Query 63806 TTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63865 | || ||||| | |||||| || ||||||||| || ||||| || || ||| | Sbjct 246297 TGAACCATTAATTTTAAGCAAGTATGAACGTTCCAAAGTCTTGAAACCGAAGTAATTGAA 246356 Query 63866 -TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTA 63924 || ||| |||| ||||| | ||| ||||||| | || ||||||| || | | Sbjct 246357 CTGGAAA-TCTCTATCGTAGACAATCGCCGAATTCAACTCATCCTTA------TTGGCCA 246409 Query 63925 TATCCATGGT-AATACTT-----GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAA 63978 | | ||| | ||| || || || || ||||| ||| || || | ||||| | Sbjct 246410 TTACAATGTTGTATATTTCATCAGAGATCATGGGAGAGTGTACACCGTTCCTGGGATTCA 246469 Query 63979 CATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGAT 64038 |||| | | | ||| ||||| | ||| |||| | || | |||||||| | Sbjct 246470 CATAATAATAGAGATCTGAAATCACCTGGGAAAACTGTTTAGTAGTCTGCTTGTGTAAGT 246529 Query 64039 TTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-G 64097 | || || || ||||| ||||| | | |||||||||| ||||| || || || || Sbjct 246530 TAGAAATTGCAATTCTTGCGGCCAAAGTGGCATAATCTGGATGAACAGTCGT-CATGTAA 246588 Query 64098 GCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCT 64157 || | | || || || | | || | ||||| ||||| || || | |||| || Sbjct 246589 GCACATGTCTCAGCAGCTAAGTTATCAAGCTCTACGGTTGTGACACCTTCGTATACGCC- 246647 Query 64158 TGAATAACCTTCATAGC--TATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAGC 64215 | | | | | | || ||||| | || ||| | |||| | | || || ||||||| Sbjct 246648 -GGAGATGATACGTTGCGTAATTTTGACAGCATCCACATGAGCTGGGTCTAGTCCATAGC 246706 Query 64216 ACAATTTTCTAATACGAGACGTGATTTTATCAAACATGACATTTTCCTTGTATCCATTTC 64275 | || | ||||||| ||||| || |||||| |||| ||||||| |||| || Sbjct 246707 ATAACCTCGATATACGAGCTGTGATCTTGTCAAACCTGACGGGTTCCTTGCGACCATCTC 246766 Query 64276 GTTTAATGACAAACATTTT 64294 ||| | |||||||| || Sbjct 246767 TTTTGAACACAAACATCTT 246785 >seq103 Length=1149457 Score = 223 bits (246), Expect = 4e-53 Identities = 593/900 (66%), Gaps = 16/900 (2%) Strand=Plus/Minus Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337 |||||| || |||||||| || || | ||||| || || |||||||||||| | Sbjct 423480 CATAACACCAGCCTTTTGGTAATCCGAAACCCTCTTTTCAAAGAAGTTAGTTTTTCCTGC 423421 Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397 || || ||||||||||| || ||||||||||| ||||||||| || | ||| | ||| Sbjct 423420 CAGCGAAATATTTTCCATAAAGTCAAACGGATTAGTAACATTG-AAGTATTTCTTGTTCC 423362 Query 33398 CAATTCAGAA-ATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33456 ||| || | || || ||||| || || || | || ||||||| | || Sbjct 423361 CAAGAGCGACCAGCAGCCTGTCTGCTACAAACTCAACGTACTGATTCATCAGCGCGGCAT 423302 Query 33457 TCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGAT---- 33512 |||| || | || || || || || | | ||||| | | ||| | ||| Sbjct 423301 TCATGCCCAGCAGAGCCACGGGGAGCGCGTCGAT--GAAATACCTTTTC--TCGATCTCG 423246 Query 33513 ACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTA 33572 || || | ||| || || | || | || | || | | || ||| | Sbjct 423245 ACAGCTTCTGTAATGATCCTTTCAATAATATCAGGATCAGGCTTGTTTCTTAGATGGGAA 423186 Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 ||||| | ||| || || || ||||| || || ||||||| ||||| ||||| ||| Sbjct 423185 AACATTAGACAAGCAAAGTCTGTGTGCAATCCTTCATCTCTACAGATTAACTCGTTTGAA 423126 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 || || || || ||||| ||||| |||||| |||||||| |||| || || ||||| Sbjct 423125 AAGGTCAGGCCTGGCATGAGGCCCTTCTTTTTGAGCCAAAAGATGGCGGCAAAAGATCCC 423066 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG 33752 || || ||||| ||||||||||| ||||| || | || ||||| | ||| || || Sbjct 423065 GAGAAAAAGATACCTTCTACTGCGGCAAATGCCACCAGCCTCTCAGCGTAAAGAGCATTG 423006 Query 33753 TCA---TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 33809 ||| || |||||| | |||||| || ||||| | || | ||| || || Sbjct 423005 TCATCTTGAATCCACCTGATAGCCCACTCAGCCTTTTCCTTGATCTGAGGGATGTGCTCA 422946 Query 33810 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGA 33869 || |||||||| | | | ||| ||| ||| || | || || ||||| || | Sbjct 422945 ATCGCATTAAACAAGAAATCCCGTTCCTTAGGATCCTTGATGTATGTCTCGATTAATAAT 422886 Query 33870 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 33929 || | |||||||| || ||||| || ||||| || |||||||||||| | ||| Sbjct 422885 GAGTAAGTCTCCGAATGGATATTTTCCATCATGATCTGGAACCCGTAGAAACATTTGGCC 422826 Query 33930 TCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCA 33989 || | ||||| || |||| |||| || ||||||| ||||| || ||||| ||| Sbjct 422825 TCTGGTATCTGAACCTCTGCGGAAAAATTCTCAACTAAATTCTCATTGACAATTCCGTCA 422766 Query 33990 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTA 34049 || ||||| || || | || ||||| || | ||| || ||| | || Sbjct 422765 GATGCCGCAAAGAAAGCTAGGACTCTAGACATAAAGAATCTCTCGCCTTCTGTCATCCTA 422706 Query 34050 TT---CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 34106 || ||||||||| |||||||| || | || | || || | ||||| || |||||| Sbjct 422705 TTTTCCCAATCATTTATATCTTTCGACAGGTCAATCTCCTCTGCAGTCCAGAAAGATGCC 422646 Query 34107 TCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTA 34166 || ||| |||| || | ||| || |||||||| ||| ||||| | || || ||| Sbjct 422645 TCCGCCCTTTTGTAGGCCTGCCAAATCTCATGATACCTGATAGGGAAGAGCACGAACCTA 422586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816773364400