Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq47 188 7e-43 seq103 131 2e-25 >seq47 Length=438083 Score = 188 bits (208), Expect = 7e-43 Identities = 407/609 (67%), Gaps = 0/609 (0%) Strand=Plus/Plus Query 37941 AAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCA 38000 ||| || ||||| | ||||| |||| ||||| ||||| || | | || | ||| Sbjct 245682 AAACTCTTTCCCGTAAACATCAGATAAACCTGGCGCTTCGCTAGGGGAGAAAAGGGTCCA 245741 Query 38001 TTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAA 38060 |||| | | | |||||| || | ||||||||| || | | |||||| || | ||| || Sbjct 245742 TTCTCCGTTCTGTTCTACACGCTTCATAAATAAGTCGGAAATCCATAACGCTGGAAACAA 245801 Query 38061 ATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATAT 38120 |||| ||| | | || || || || ||| || || | | | |||||| || || Sbjct 245802 ATCTCTGGCGCGAATCTCCTCCTTACCGTGATTTTTCCTAATGTCGATAAAATCAAAAAT 245861 Query 38121 ATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTG 38180 |||||||||||| || || | ||| | | | || || |||||||||| ||| || || Sbjct 245862 ATCAGCGTGCCAGGGCTCCAAATATAGGGCAAAAGCGCCAGGTCTTTTATTACCACCTTG 245921 Query 38181 ATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTT 38240 | | ||| | | | || |||||| | | | | ||| || | || ||||||||| | Sbjct 245922 GTCCACATACCGAGCAGTATTATTAAAAACACGAATCATGGGGATTAGTCCATTAGATGT 245981 Query 38241 GCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTAT 38300 ||||| |||| | ||||| | ||| | | || ||||| || ||| || || Sbjct 245982 ACCGTTGGTACCAGCAATATACGAACCAGTTGAACGGATATTGTGGATATGCAAACCAAT 246041 Query 38301 TCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTAT 38360 ||||| ||| || || || | ||| |||| ||||| || ||| | ||||| || || Sbjct 246042 ACCACCAGCAGTCTTGGAGATCATAGCACATTCTTTTAGAGTGTCATAGATACCCTCGAT 246101 Query 38361 ACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGC 38420 | |||||| || || | || | || ||| || ||| ||||| ||| ||||| || Sbjct 246102 AGAGTCATCTTTCATGGCTACCAGGAAGCAAGAAGCCATCTGAGGATGTGGGGTTCCTGC 246161 Query 38421 GTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTC 38480 || |||| ||||| || || || ||||| | || |||| || || || || Sbjct 246162 ATTGAATAGCGTAGGGGAAGCGTGGATGAAATACCTTAGAGACATTAGGTTGTAAGTCTC 246221 Query 38481 TATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTG 38540 || | | | |||||| | |||||||| || || || || ||||||| | |||||| Sbjct 246222 AATAGCTGCCTTAATATCATCACCGTGAATGCCAAGCGAAACTCTCATTATTAAATGTTG 246281 Query 38541 TGGTCTTTC 38549 ||||| || Sbjct 246282 AGGTCTCTC 246290 >seq103 Length=1149457 Score = 131 bits (144), Expect = 2e-25 Identities = 396/605 (65%), Gaps = 14/605 (2%) Strand=Plus/Minus Query 11620 AAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGA 11679 |||||||| ||| ||||| || || || ||||| ||||||| |||| || || || Sbjct 423186 AAACATTAGACAAGCAAAGTCTGTGTGCAATCCTTCATCTCTACAGATTAACTCGTTTGA 423127 Query 11680 AAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACC 11739 ||| || | || ||||| | || ||||| | |||||| || || ||||| || || Sbjct 423126 AAAGGTCAGGCCTGGCATGAGGCCCTTCTTTTTGAGCCAAAAGATGGCGGCAAAAGATCC 423067 Query 11740 AGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCTT 11796 || || || || || || || || |||||||| || | || || | || | | || Sbjct 423066 CGAGAAAAAGATACCTTCTACTGCGGCAAATGCCACCAGCCTCTCAGCGTAAAGAGCATT 423007 Query 11797 GTTG-CTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTT 11855 || || || ||||| | | ||||| ||||| || | || | || | Sbjct 423006 GTCATCTTGA-ATCCACCTGATAGCCCACTCAGCCTTTTCCTTGATCTGAGGGATGTGCT 422948 Query 11856 CTATAGCGTTAAATAAATGCATTTT--TTCTATATTATCTCTTACATATGTATCTATTAA 11913 | || || ||||| || | | | ||| || ||| | | ||||| || ||||| Sbjct 422947 CAATCGCATTAAACAA--GAAATCCCGTTCCTTAGGATCCTTGATGTATGTCTCGATTAA 422890 Query 11914 TAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCG 11973 ||| || | || ||||| ||||||||||| || || || || ||||||||| Sbjct 422889 TAATGAGTAAGTCTCCGAATGGATATTTTCCATCATGATCTGGAACCCGTAGAAACATTT 422830 Query 11974 TGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACC 12033 ||||||| ||| || || | |||| | || ||||||||||||| ||||| || Sbjct 422829 GGCCTCTGGTATCTGAACCTCTGCGGAAAAATTCTCAACTAAATTCTCATTGACAATTCC 422770 Query 12034 ATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTA- 12092 ||| | ||||| || ||||| | |||||| || | ||| ||| || | Sbjct 422769 GTCAGATGCCGCAAAGAAAGCTAGGACTCTAGACATAAAGAATCTCTCGCCTTCTGTCAT 422710 Query 12093 ---ATTTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAAC 12149 |||| |||||||||| || |||||| || | || | || || | ||||| ||| Sbjct 422709 CCTATTT-TCCCAATCATTTATATCTTTCGACAGGTCAATCTCCTCTGCAGTCCAGAAAG 422651 Query 12150 TTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGA 12209 |||| | | ||| || | ||| || ||||||||| | |||||||| | |||| Sbjct 422650 ATGCCTCCGCCCTTTTGTAGGCCTGCCAAATCTCATGATACCTGATAGGGAAGAGCACGA 422591 Query 12210 ACCTA 12214 ||||| Sbjct 422590 ACCTA 422586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524185061200