Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq47 295 9e-75 seq103 206 4e-48 seq36 136 5e-27 >seq47 Length=438083 Score = 295 bits (326), Expect = 9e-75 Identities = 1459/2295 (64%), Gaps = 62/2295 (3%) Strand=Plus/Plus Query 64835 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 64893 |||| |||||||| |||| || ||||| | | ||| | | |||||||| || || | Sbjct 244511 CAATAGTGAATTGGATGGCTGCAGATGCTGCCTGCGTCCTCAAGTAGTACATACCTGTCT 244570 Query 64894 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 64953 | || || |||| |||||||| |||||||| |||||||| | ||| | Sbjct 244571 TCAGGCCCTTTTTCCAACCGTAAAAGTGCATACTTGTTAGTTTACCCATGGTTGGAGCGC 244630 Query 64954 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 65013 ||||| || |||| || || ||||| ||||| || | | ||| || ||||| | Sbjct 244631 GCATATGAATGTTCAACGAGTGGGACTGATCAATGAATGCAGCGCGGTCCGCGGCCATAT 244690 Query 65014 TTATGATC-GTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTC 65071 || || |||| | | | ||||||||| | ||| || || || || || | |||| Sbjct 244691 CGATAATATGTCTCTGG-GAAATTTCCCATACAGTCTTGTATAAATCT-TTCAGCTCTTG 244748 Query 65072 TGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGAT-CT 65127 |||| ||||| |||| |||||||||||| || | || || | ||| || || Sbjct 244749 AGGAACGTTTGGAATATTTTGAATGGATCCATTGTCAGTAATGATTTGTTGCTTCATGCT 244808 Query 65128 CATCATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 65186 | |||| ||| |||| | ||| ||| | | || | || |||||| || | |||| Sbjct 244809 C-TCATCCCA-AATTCCCAGATCGACCAAATCACGTAGTAAATACGGATTCACAATTTGA 244866 Query 65187 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 65246 ||||| ||||| | || | |||| || ||||| || || || || | | ||| Sbjct 244867 AATTCACCAGAAAGCACACGACGAGAATACATATTGGACGTGTAAGGCTCGAAGCATTCA 244926 Query 65247 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 65306 || | ||||| || || | ||| || ||||| |||||||| || || | || || Sbjct 244927 TTGTAGCCCAAGATCTGGGAAGTAGAAGCAGTAGGCATAGGGGCAACAAGCAAGGAGTTA 244986 Query 65307 CTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGT 65366 | | ||||| || ||| || | | | || ||||||| ||| || || || || Sbjct 244987 CGCACACCGTGTGCCTTGAGATTCTGCCTCAAAGTATCCCAATCCCATAGTTCAGAAGGC 245046 Query 65367 ACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTAC--TGGCGTACGATCCTACATATG 65424 ||| | | ||| || | | | | ||||| |||| | Sbjct 245047 TTTTTGTCCCATAGATCGAATTGCAATA-ACCCTTGCGATATGGGA-GATCCCTCATAAG 245104 Query 65425 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 65484 | || || | || | ||||| | ||| || || || ||||| ||||| | |||| Sbjct 245105 TCTCATAAGTACCATGCTTCTGTGATAGCTCGCATGAAGCTTCTAAAGCACCATGGTAAA 245164 Query 65485 TGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTA 65544 | ||||| || || | || ||||| | |||||| || ||||| || | Sbjct 245165 TCGTTTCAAATATTTGCTGGTTTAGCGTTCTCGCTTCCGCAGATTCGAATGGTAAACGCA 245224 Query 65545 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 65604 | | ||||| | ||| ||||| || | || || | | | || || ||||||||| | | Sbjct 245225 ACATCATAAAAGTGTCAGCTAACCCATTGACCCCTAGAGCAATTGGCCTATGTCTCATGT 245284 Query 65605 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 65664 | || ||| ||| || || | ||||||||| ||| || |||||||| || | ||| | Sbjct 245285 TGGATTTTTTAGCCTCAGGGACAGGATAATAGTTACGGTCAATAATTTTGTTCAAATTAC 245344 Query 65665 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAA---TCAAATCGCTC------AT 65715 ||| | ||| | || || | || ||| ||| | || | || || Sbjct 245345 GTGTAATGGCCTTGGCAACCTCATGCAACTTGGCAAAGCTGTACCATTGTTCTTTACCAT 245404 Query 65716 CTATT---------ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCT 65766 || | ||| | | | |||| ||| |||||||| ||||| || | Sbjct 245405 CTTTCGACACCTCGACACAAGAGGGAAGCGCAATAGAAGCCAGATTGCAAACTGCAGATT 245464 Query 65767 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 65826 ||| ||| | |||| | || ||| |||||||| | || || || | Sbjct 245465 CATCCTTATCGGAGTATTCAACAATTTCACAACAAAGATTGGATGATTTAATCACACCCA 245524 Query 65827 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAG 65886 || | ||| |||||||||| || || |||||||| || | || || || ||||||| Sbjct 245525 GGTTCTTTTGGTTACTCTTTTCATTGCAAGCATCCTTGTATAACATAAAAGGTGTACCAG 245584 Query 65887 TTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGATTTG 65945 |||| |||||| ||| | || || | ||| | | || ||||| ||||| | ||| Sbjct 245585 TTTCTGTCTGAGCTTCGAGGATGGCGTACCACAACTTCT-GAGCCCTTATTGTC--TTTC 245641 Query 65946 TATCTCTTTTCTCTT--TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACAT 66003 || | | |||| || ||| | ||| | ||| ||||| | || |||||| Sbjct 245642 TACCACGCCCTTCTTGCTCATATCTTTCATATAGCGCTTCAAACTCTTTCCCGTAAACAT 245701 Query 66004 TGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTC 66063 || || || ||| || | | | | ||| ||||||| | | || | Sbjct 245702 CAGATAAACCTGGCGCTTCGCTAGGGGAGAAAAGGGTCCATTCTCCGTTCTGTTCTACAC 245761 Query 66064 GTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCT 66123 | |||||||| | || | |||||| | ||| ||| |||||||||| | | |||| Sbjct 245762 GCTTCATAAATAAGTCGGAAATCCATAACGCTGGAAACAAATCTCTGGCGCGAATCTCCT 245821 Query 66124 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCA 66183 | || || ||| || ||| |||| || | | ||||||| ||||| || |||| Sbjct 245822 CCTTACCGTGATTTTTCCTAATGTCGATAAAATCAAAAATATCAGCGTGCCAGGGCTCCA 245881 Query 66184 AGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 66243 | |||| ||| | | | ||||| | ||| || || || || || | || | ||| || | Sbjct 245882 AATATAGGGCAAAAGCGCCAGGTCTTTTATTACCACCTTGGTCCACATACCGAGCAGTAT 245941 Query 66244 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATAT 66303 ||||| |||| | | ||| || || | ||||| |||||||| ||||| || | |||| Sbjct 245942 TATTAAAAACACGAATCATGGGGATTAGTCCATTAGATGTACCGTTGGTACCAGCAATAT 246001 Query 66304 AGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGA 66363 | ||| ||| ||| ||||| || | ||| || || || || | || |||| Sbjct 246002 ACGAACCAGTTGAACGGATATTGTGGATATGCAAACCAATACCACCAGCAGTCTTGGAGA 246061 Query 66364 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 66423 | | || ||| ||||| || |||||||| ||||| ||| ||||| ||||| | Sbjct 246062 TCATAGCACATTCTTTTAGAGTGTCATAGATACCCTCGATAGAGTCATCTTTCATGGCTA 246121 Query 66424 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 66483 || || || || ||| || || | ||||| ||||| |||| ||||| |||| Sbjct 246122 CCAGGAAGCAAGAAGCCATCTGAGGATGTGGGGTTCCTGCATTGAATAGCGTAGGGGAAG 246181 Query 66484 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-C 66542 |||| | || | || ||| | ||| ||||| ||||||||||||| | ||||| Sbjct 246182 CGTGGATGAAATACCTTAGAGACATTAGGTTGTAAGTCTCAATAGCTGCCTTAATATCAT 246241 Query 66543 CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 66602 || | ||||| || | | || | ||||| | || |||||||| ||| ||| Sbjct 246242 CACCG-TGAATGCCAAGCGAAACTCTCATTATTAAATGTTGAGGTCTCTCAGCGACTGAA 246300 Query 66603 TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGA 66661 || ||||| | |||||| || ||||||||| || ||||| || || ||| | || Sbjct 246301 CCATTAATTTTAAGCAAGTATGAACGTTCCAAAGTCTTGAAACCGAAGTAATTGAACTGG 246360 Query 66662 AAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATC 66721 ||| |||| ||||| | ||| |||| || | | ||||||| ||| | |||| Sbjct 246361 AAA-TCTCTATCGTAGACAATCGCCGAATTCAACTCATCCTTA---TTGGCCATTACA-- 246414 Query 66722 CATGGT-AATACTT-----GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATA 66775 ||| | ||| || || || || ||||| ||| || || | ||||| ||||| Sbjct 246415 -ATGTTGTATATTTCATCAGAGATCATGGGAGAGTGTACACCGTTCCTGGGATTCACATA 246473 Query 66776 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGA 66835 | | | ||| ||||| | ||| |||| | || | ||||||| || || Sbjct 246474 ATAATAGAGATCTGAAATCACCTGGGAAAACTGTTTAGTAGTCTGCTTGTGTAAGTTAGA 246533 Query 66836 TACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTG 66894 | || ||||| ||||| | | |||||||||| ||||| || || || || || Sbjct 246534 AATTGCAATTCTTGCGGCCAAAGTGGCATAATCTGGATGAACAGTCGT-CATGTAAGCAC 246592 Query 66895 CTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGA 66954 | | || || || | | || | ||||| ||||| || || | |||| || ||| Sbjct 246593 ATGTCTCAGCAGCTAAGTTATCAAGCTCTACGGTTGTGACACCTTCGTATACGCC--GGA 246650 Query 66955 TAACCTTCATAGC--TATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAA 67012 | | | | || ||||| | || ||| | |||| | | || || ||||| ||||| Sbjct 246651 GATGATACGTTGCGTAATTTTGACAGCATCCACATGAGCTGGGTCTAGTCCATAGCATAA 246710 Query 67013 TTTTCTAATACGAGATGTGATTTTATCAAACATGACATTTTCCTTGTATCCATTTCGTTT 67072 | ||||||| |||||| || |||||| |||| ||||||| |||| || ||| Sbjct 246711 CCTCGATATACGAGCTGTGATCTTGTCAAACCTGACGGGTTCCTTGCGACCATCTCTTTT 246770 Query 67073 AATGACAAACATTTT 67087 | |||||||| || Sbjct 246771 GAACACAAACATCTT 246785 >seq103 Length=1149457 Score = 206 bits (228), Expect = 4e-48 Identities = 392/576 (68%), Gaps = 6/576 (1%) Strand=Plus/Minus Query 36148 AAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGA 36207 |||||| | ||| || || || ||| | || || ||||||| ||||| ||||| || Sbjct 423186 AAACATTAGACAAGCAAAGTCTGTGTGCAATCCTTCATCTCTACAGATTAACTCGTTTGA 423127 Query 36208 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCC 36267 ||| || || || ||||| ||||| |||||| |||||||| |||| ||||| ||||| Sbjct 423126 AAAGGTCAGGCCTGGCATGAGGCCCTTCTTTTTGAGCCAAAAGATGGCGGCAAAAGATCC 423067 Query 36268 AGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT 36327 || || || || ||||||||||| ||||| || | || ||||| | ||| ||| | Sbjct 423066 CGAGAAAAAGATACCTTCTACTGCGGCAAATGCCACCAGCCTCTCAGCGTAAAGAGCATT 423007 Query 36328 GTCA---TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 36384 |||| || |||||| | |||||| || ||||| | || | ||| || ||| Sbjct 423006 GTCATCTTGAATCCACCTGATAGCCCACTCAGCCTTTTCCTTGATCTGAGGGATGTGCTC 422947 Query 36385 TATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAG 36444 || |||||||| | | | ||| ||| ||| || | ||||| || || || | Sbjct 422946 AATCGCATTAAACAAGAAATCCCGTTCCTTAGGATCCTTGATGTATGTCTCGATTAATAA 422887 Query 36445 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGC 36504 || | |||||||| || ||||| || || || || |||||||||||| | || Sbjct 422886 TGAGTAAGTCTCCGAATGGATATTTTCCATCATGATCTGGAACCCGTAGAAACATTTGGC 422827 Query 36505 CTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTC 36564 ||| | ||||| || |||| |||| || ||||||| ||||| || |||||||| Sbjct 422826 CTCTGGTATCTGAACCTCTGCGGAAAAATTCTCAACTAAATTCTCATTGACAATTCCGTC 422767 Query 36565 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTT 36624 | || ||||| || || | || ||||| || | ||| | ||| | | Sbjct 422766 AGATGCCGCAAAGAAAGCTAGGACTCTAGACATAAAGAATCTCTCGCCTTCTGTCATCCT 422707 Query 36625 ATT---CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 36681 ||| ||||||||| |||||||| || | || | || || | ||||| || ||||| Sbjct 422706 ATTTTCCCAATCATTTATATCTTTCGACAGGTCAATCTCCTCTGCAGTCCAGAAAGATGC 422647 Query 36682 CTCTGCCTTTTTATACATATTCCAGATGTCATGATA 36717 ||| ||| |||| || | ||| || |||||||| Sbjct 422646 CTCCGCCCTTTTGTAGGCCTGCCAAATCTCATGATA 422611 >seq36 Length=192470 Score = 136 bits (150), Expect = 5e-27 Identities = 491/752 (65%), Gaps = 21/752 (3%) Strand=Plus/Minus Query 65959 TTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGAC 66018 |||| ||| | ||||||| ||| || || || || |||||| || || || || Sbjct 95507 TTTCATATTTTTCATACAATTCTTCAAATTCCTCCCCATAAACATCGTTTAACCCTGGCG 95448 Query 66019 ATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGAT 66078 |||||| |||| | || |||| ||||||| | ||| | ||||| || | | Sbjct 95447 CTTCATCTGGACTGAATAAACACCATTCTCCGTTGGATTGCACCCTCTTCATGAATAAGT 95388 Query 66079 CAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCT 66138 | |||||||| | ||||| |||||||||||| | || | ||||| ||||| || | Sbjct 95387 CTGGAATCCATAAAGCTAGAAATAAATCTCTAGCCCTGAGCTCCTCTTTTCCGTGGTTTT 95328 Query 66139 TTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATA- 66197 || | || | | || | | | ||| ||||||| || |||||||| || || ||| Sbjct 95327 TTCTGAGTTGCAAAAAGTCGAAGACATCTGAATGCCAGGGCTCCAAGTAAAT-GCAATAG 95269 Query 66198 ACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 66257 |||| || | ||| || ||||| ||||| | ||||| || ||||| || |||| | Sbjct 95268 GCTCCCGGTCTTTTATTACCTCCTTGATCGACATATCTGGCCGTGTTGTTGAAAACACGA 95209 Query 66258 AACATTGGAA-TAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGC 66316 | ||| |||| |||| |||||||| || || | ||| || | ||| || || | Sbjct 95208 AGCATAGGAACTAAT-CCATTGGAAACTCCGTTAGACCCCGATACGTAGGCACCGCTGCC 95150 Query 66317 ACGAATATT--ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC-GCA 66373 | || || | || ||| |||||||||||| | || || ||||| || | Sbjct 95149 TCTTATGTTGGAAACATGGAT--ACCTATTCCCCCGGAGGCCTTTGAAATTAAAGCTGTC 95092 Query 66374 TCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACA 66433 || | || ||| | | | ||||| || || ||| || ||||| | | ||||| || Sbjct 95091 TC-ATGTAGCGTCTTAAAAATGCCATCAATGGAATCTTCTTTCATGCTTACGAGAAAGCA 95033 Query 66434 GCTAGACATTTGGTGA-CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 66492 |||| | ||| ||| ||| || |||||||| |||||||| || || || ||| Sbjct 95032 TGATGACAGATACTGATTGAC-AGTACCGGCATTAAACAAGGTAGGCGATGCATGTATAA 94974 Query 66493 ACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCC---ATTGA- 66548 | |||||| ||| | || | ||| || | || | | |||||||||| | || Sbjct 94973 AAAATTTTTGAGACATGAGTTCGTAGGTATTAAGTACGGCATCTATATCCCCAAAAGGAC 94914 Query 66549 --TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT-TGTTG 66605 || || | | || || | ||| |||||| ||| || |||| |||| || || Sbjct 94913 CGTGTATAGCCAAAGCAACTCTCATGAACATGAACTGCGGGGTTTCGTGAATCTGTGCTG 94854 Query 66606 TTTATT--TTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 66663 | | || || | ||||| || | ||| ||||| | |||||||| || | | | Sbjct 94853 TATCTTTCTTGACTAAGTAAGACTGACACAACGTTTTCCAGCCAAAATAAGTGAAATAGA 94794 Query 66664 AGTCTCGTTCGTAAATAATAACCGAGTTGAGT 66695 |||| | ||| | | |||| || ||| ||| Sbjct 94793 AGTCCCTTTCATGTACAATAGCCTTGTTCAGT 94762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171936148200