Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq103 129 6e-25 >seq103 Length=1149457 Score = 129 bits (142), Expect = 6e-25 Identities = 469/724 (65%), Gaps = 10/724 (1%) Strand=Plus/Minus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 ||||| || || ||| || |||||||||||||||||||| ||| |||| || |||||| Sbjct 423467 TTTTGGTAATCCGAAACCCTCTTTTCAAAGAAGTTAGTTTTTCCTGCCAGCGAAATATTT 423408 Query 13641 TCCATAAAATCAAATGGATTTATTGACATA-AACACTTTATCACAACCTAGTTCTAATAG 13699 |||||||| ||||| ||||| | | |||| || ||| | || || | | || Sbjct 423407 TCCATAAAGTCAAACGGATT-AGTAACATTGAAGTATTTCTTGTTCCCAAGAGCGACCAG 423349 Query 13700 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13759 | || || || | |||||||| || ||| ||| | | |||||| || | || Sbjct 423348 CAGCCTGTCTGCTACAAACTCAACGTACTGATTCATCAGCGCGGCATTCATGCCCAGCAG 423289 Query 13760 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAAT 13819 || || | | | | ||| | ||| || || ||||| ||| | || || Sbjct 423288 AGCCACGGGGAGCGCGTCGATGAAATACCTTTTCTCGATCTCGACAGCTTCTGTAATGAT 423229 Query 13820 AATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 13879 || |||||| ||| | ||| | | ||||||| ||| |||| ||| ||||| Sbjct 423228 CCTTTCAATAATATCAGGATCAGGCTTGTTTCTTAGATGGGAAAACATTAGACAAGCAAA 423169 Query 13880 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 13939 || || | || |||||||||| || | ||||||||||| || | |||||||| Sbjct 423168 GTCTGTGTGCAATCCTTCATCTCTACAGATTAACTCGTTTGAAAAGGTCAGGCCTGGCAT 423109 Query 13940 CAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTC 13999 | || ||||| | |||||| || || ||||| || || || || || || || || Sbjct 423108 GAGGCCCTTCTTTTTGAGCCAAAAGATGGCGGCAAAAGATCCCGAGAAAAAGATACCTTC 423049 Query 14000 AACTGCAGCAAACGCTATTAATCGTTC-TCCAAACGATGCTTTTTTGT-TCGATATCCAT 14057 ||||| ||||| || | | | || | || || || || | | | || ||||| Sbjct 423048 TACTGCGGCAAATGCCACCAGCCTCTCAGCGTAAAGA-GCATTGTCATCTTGA-ATCCAC 422991 Query 14058 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAA 14117 | ||||||| |||| |||| || || | || ||||| |||||||| || Sbjct 422990 CTGATAGCCCACTCAGCCTTTTCCTTGATCTGAGGGATGTGCTCAATCGCATTAAACAAG 422931 Query 14118 TATTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 14175 | ||| || |||| | |||| |||||||| || || | ||| || | || | Sbjct 422930 AAATCCCGTTCCTTAGGATCCTTG--ATGTATGTCTCGATTAATAATGAGTAAGTCTCCG 422873 Query 14176 AGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTA 14235 | || || |||||||| ||||| || || || || ||| | || || | || | Sbjct 422872 AATGGATATTTTCCATCATGATCTGGAACCCGTAGAAACATTTGGCCTCTGGTATCTGAA 422813 Query 14236 CTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAA 14295 | || | | |||| | || | ||||| ||||| || || || ||| || ||||| | Sbjct 422812 CCTCTGCGGAAAAATTCTCAACTAAATTCTCATTGACAATTCCGTCAGATGCCGCAAAGA 422753 Query 14296 ATGC 14299 | || Sbjct 422752 AAGC 422749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727370357000