Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq103 183 4e-41 >seq103 Length=1149457 Score = 183 bits (202), Expect = 4e-41 Identities = 401/593 (68%), Gaps = 11/593 (2%) Strand=Plus/Plus Query 124999 TTCCC-ATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057 ||||| |||||||||||||| |||||| | ||||||| ||| |||| || || ||| Sbjct 422599 TTCCCTATCAGGTATCATGAGATTTGGCAGGCCTACAAAAGGGCGGAGGCATCTTTCTGG 422658 Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117 || | || ||| | || ||||| || || | | |||||||| | | | |||| ||| Sbjct 422659 ACTGCAGAGGAGATTGACCTGTCGAAAGATATAAATGATTGGGAAAATAGGATGACAGAA 422718 Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177 ||| || ||||| || | | || |||||||| | || || ||||| ||| Sbjct 422719 GGCGAGAGATTCTTTATGTCTAGAGTCCTAGCTTTCTTTGCGGCATCTGACGGAATTGTC 422778 Query 125178 AACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTT 125236 || || ||| | ||||| | || | || ||| | || ||||||| || || Sbjct 422779 AATGAGAATTTAGTTGAGAATTTTTCCGCAGAGGTTCAG-ATACCAGAGGCCAAATGTTT 422837 Query 125237 TTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296 ||||| ||||| |||||||| || || | || ||||| | ||||| | | || || Sbjct 422838 CTACGGGTTCCAGATCATGATGGAAAATATCCATTCGGAGACTTACTCATTATTAATCGA 422897 Query 125297 CATGTACATTCGCGATCC---GCAACGTAAACACATGCTCTTTAACGCAATCGA-CACGG 125352 | ||||| ||||| | |||| | | || ||||| || || || ||| Sbjct 422898 GACATACATCAAGGATCCTAAGGAACGGGATTTCTTG---TTTAATGCGATTGAGCACA- 422953 Query 125353 TGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTT 125412 | || || |||||||| | |||| || ||||||| | || ||||| || Sbjct 422954 TCCCTCAGATCAAGGAAAAGGCTGAGTGGGCTATCAGGTGGATTCAAGATGACAATGCTC 423013 Query 125413 CGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTT 125472 ||||| || || ||||||||||| ||||| ||||| || ||||| || ||||| || Sbjct 423014 TTTACGCTGAGAGGCTGGTGGCATTTGCCGCAGTAGAAGGTATCTTTTTCTCGGGATCTT 423073 Query 125473 TTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACG 125532 |||| ||||||||||||||||| ||| || |||||||| || ||||| |||| Sbjct 423074 TTGCCGCCATCTTTTGGCTCAAAAAGAAGGGCCTCATGCCAGGCCTGACCTTTTCAAACG 423133 Query 125533 AGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTT 125585 |||| || | | |||| || || | ||| |||||||| |||| ||||| Sbjct 423134 AGTTAATCTGTAGAGATGAAGGATTGCACACAGACTTTGCTTGTCTAATGTTT 423186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058227359800