Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq40 109 5e-19 seq33 86.0 5e-12 seq70 84.2 2e-11 >seq40 Length=692676 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| ||| || | ||||| |||||| ||||| ||||| ||||| || || || | | Sbjct 222421 CCACCTCTCAATCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGAC 222362 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| || | ||||||| || ||||| ||| | || | |||||||||||| || Sbjct 222361 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGA 222302 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || || ||||| ||| || || || | | ||| ||| || || ||| | Sbjct 222301 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGACT 222242 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044 || | |||||| || ||||| || || || ||||| ||||| ||||| || Sbjct 222241 TCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCATCTT 222192 >seq33 Length=533711 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/133 (75%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 21139 ACGTTGCCCAGATCGCCGACGTGCCGCTCTGCGGCGTCGGGAGCGCCGTGATTTTGGTGC 21198 || |||||||| || || ||||||| | | |||| || ||||| ||||| | | ||| Sbjct 424937 ACATTGCCCAGGTCACCAACGTGCCTCACATCGGCTTCAGGAGCACCGTGTGTCT--TGC 424994 Query 21199 GTAG--GGTTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAACTCGT 21256 ||| |||||||||| ||||| || ||||| ||||| || |||| |||||||||| Sbjct 424995 CTAGAGGGTTAAAGTGAGGACCGGCAGATGTGCACCCGTTAGTGTTGTCACCGAACTCGT 425054 Query 21257 GAACGTGAAAGCC 21269 ||| ||| || || Sbjct 425055 GAATGTGGAACCC 425067 >seq70 Length=181133 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| || || || || | ||| | || || |||||||| ||||||||||| | Sbjct 22945 CCACCTCTTAATCTCAAAACGAGGTGTAGAGTTGATTCCTTTTGGATATTGTAATCAGAT 23004 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| || | ||||||| ||| ||||| || | || | ||| |||||||| || Sbjct 23005 AAAGTTCTGCCATCCTCCAACTGCTTACCTGCGAAGATCAATCTTTGCTGATCAGGTGGG 23064 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCG-T 18993 | ||| ||||| || || ||| ||||| | | ||| ||| || ||| | || Sbjct 23065 ATGCCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTC-AGAGGATTCGAC 23123 Query 18994 TTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | ||||| || ||||| || | ||| || |||||||| ||||| Sbjct 23124 CTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 23171 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 18827 CTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCG 18886 || || |||| ||||| || ||||| |||||||| || || || | | ||| | | Sbjct 22729 CTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTTCCA 22788 Query 18887 TCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTG 18946 ||||||||||| ||||| ||| | || | ||| || || || || | || ||||| Sbjct 22789 TCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTA 22848 Query 18947 TCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATG 19006 || || ||| ||||| | | ||| ||| || || |||| || | ||||| Sbjct 22849 TCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACCTCTAATGTAATA 22908 Query 19007 GTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || || || || || ||||| |||||||| ||||| Sbjct 22909 GTCTTGCCGGTCAATGTTTTAACAAAAATCTGCAT 22943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414572269476370