Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq70 96.9 2e-15 >seq70 Length=181133 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||||| | ||| |||| ||||||||| ||||||||||| || || || ||||| Sbjct 22260 ACCACCTCTTAGTCTCAAAACCAGATGCAATGTTGACTCTTTTTGAATGTTATAGTCAGA 22319 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | | | | || |||| ||||| || ||| || || | ||| ||||| | || Sbjct 22320 TAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGG 22379 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || |||||||| || ||| | ||||| | | || ||||| || || ||| Sbjct 22380 GATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAAC 22439 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || || || || |||||||| || || ||||| ||||| Sbjct 22440 CTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 22487 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||||| | ||| |||| |||||| || ||||||||||| || || || ||||| Sbjct 22488 ACCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGA 22547 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | | | | || |||| ||||| || ||| || || | ||| ||||| | || Sbjct 22548 TAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGG 22607 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || |||||||| || ||| | ||||| | | || ||||| || || ||| Sbjct 22608 GATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAAC 22667 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || || || || |||||||| || || || || ||||| Sbjct 22668 CTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 22715 Score = 87.8 bits (96), Expect = 1e-12 Identities = 164/240 (68%), Gaps = 1/240 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||||||| | ||| || | || | || || || ||||| |||||||||||||| Sbjct 22944 ACCACCTCTTAATCTCAAAACGAGGTGTAGAGTTGATTCCTTTTGGATATTGTAATCAGA 23003 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | || ||||| ||||| || || || || | |||||| || | || Sbjct 23004 TAAAGTTCTGCCATCCTCCAACTGCTTACCTGCGAAGATCAATCTTTGCTGATCAGGTGG 23063 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 ||||||||||| || ||| | ||||| | | || ||||| || || || Sbjct 23064 GATGCCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCGAC 23123 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTAT-GGTTA 33380 || || || || || || || |||||||| || || ||||| |||||| ||| ||||| Sbjct 23124 CTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCATGCCTATCGGTTA 23183 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||||||| | | ||| | ||| | |||||||||||||| || ||||| ||||| Sbjct 22032 ACCACCTCTTAATCTTAGCACAAGATGTAGGGTCGACTCTTTTTGAATGTTGTAGTCAGA 22091 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | | | | || |||| |||||| || ||| || || | || ||||| | || Sbjct 22092 AAGAGTTCTTCCATCCTCCAGTTGCTTACCTGCAAAGATCAATCTCTGTTGGTCGGGCGG 22151 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 ||||| || || || |||| ||| || | | ||| || || || || ||| Sbjct 22152 AATGCCCTCCTTGTCCTGAATCTTGGATTTGACATTGTCAATGGTATCAGAGGATTCAAC 22211 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || || || || |||||||| || || ||||| ||||| Sbjct 22212 TTCGAGTGTAATAGTCTTACCGGTAAGAGTCTTAACAAAAATCTGCAT 22259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318777192064290