Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq103 233 2e-56 >seq103 Length=1149457 Score = 233 bits (258), Expect = 2e-56 Identities = 568/850 (67%), Gaps = 19/850 (2%) Strand=Plus/Minus Query 12839 TTATTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTT 12898 || |||| ||||||| ||||| || || ||| || |||||||| ||||| ||| Sbjct 423488 TTCTTTGCCATAACACCAGCCTTTTGGTAATCCGAAACCCTCTTTTCAAAGAAGTTAGTT 423429 Query 12899 TTTCCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAAT--AGTATT 12956 |||||| | | |||||||||||||||||| || || ||||| | |||| | |||||| Sbjct 423428 TTTCCTGCCAGCGAAATATTTTCCATAAAGTCAAACGGATTAGT--AACATTGAAGTATT 423371 Query 12957 TTTTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTA 13016 | || ||| | | | | || ||||| || |||||||| | |||||| ||||| | Sbjct 423370 TCTTGTTCCCAAGAGCGACCAGCAGCCTGTCTGCTACAAACTCAACGTACTGATTCATCA 423311 Query 13017 AATCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTA 13076 | ||||| || | | || || | || || | ||| | |||| || | Sbjct 423310 GCGCGGCATTCATGCCCAGCAGAGCCACGGGGAGCGCGTCGATGAAATACCTTTTCTCGA 423251 Query 13077 TATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAAT-GGAGGATTTGATAGA 13135 | || || ||||| ||| || || | | || || | || ||| |||| Sbjct 423250 TCTCGACAGCTTCTGTAATGATC-CTTTCAATAATATCAGGATCAGGCTTGTTTCTTAGA 423192 Query 13136 TGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCG 13195 || |||||| | ||| ||||| || |||||||||||||||||||| |||| |||| Sbjct 423191 TGGGAAAACATTAGACAAGCAAAGTCTGTGTGCAATCCTTCATCTCTACAGATTAACTCG 423132 Query 13196 TTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAAC 13255 |||||||| || || || ||||| || || ||||| | |||||| || || ||||| Sbjct 423131 TTTGAAAAGGTCAGGCCTGGCATGAGGCCCTTCTTTTTGAGCCAAAAGATGGCGGCAAAA 423072 Query 13256 GAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTA 13315 || ||||| ||||| || ||||| ||||| ||||| || | || ||| ||| | || | Sbjct 423071 GATCCCGAGAAAAAGATACCTTCTACTGCGGCAAATGCCACCAGCCTCTCAGCGTAAAGA 423012 Query 13316 CTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTG-CTTTTTGTTTAACGCAGTTCAT 13374 ||| | | | |||||| | | ||||| | | ||||| || | | || || Sbjct 423011 GCATTGTCATCTTGAATCCACCTGATAGCCCACTCAGCCTTTTCCTTGATCTGAG-GGAT 422953 Query 13375 ATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTAT 13434 | || || || ||||| || ||| ||||||| || || || || || || Sbjct 422952 GTGCTCAATCGCATTAAACAAGAAATCCCGTTCCTTAGGATCCTTGATGTATGTCTCGAT 422893 Query 13435 CAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACA 13494 ||||| || | || ||||| |||||||||||| || ||||| || || ||||| Sbjct 422892 TAATAATGAGTAAGTCTCCGAATGGATATTTTCCATCATGATCTGGAACCCGTAGAAACA 422833 Query 13495 TCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTAT 13554 | | ||||||| || |||||| || | | |||| | || |||| || || || || || Sbjct 422832 TTTGGCCTCTGGTATCTGAACCTCTGCGGAAAAATTCTCAACTAAATTCTCATTGACAAT 422773 Query 13555 CCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCT-TA---ATAAAttttttttCGTTTT 13610 |||||| || ||||| ||||| || | || || ||||| | | ||| || Sbjct 422772 TCCGTCAGATGCCGCAAAGAAAGCTAGGA----CTCTAGACATAAAGAATCTCTCGCCTT 422717 Query 13611 CTGACAAC---TTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCC 13667 ||| || | ||| |||||| | |||||| || | || | |||||| | |||| Sbjct 422716 CTGTCATCCTATTTTCCCAATCATTTATATCTTTCGACAGGTCAATCTCCTCTGCAGTCC 422657 Query 13668 AAAAAGAAGC 13677 | ||||| || Sbjct 422656 AGAAAGATGC 422647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430981848477210