Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq70 190 5e-43 seq103 185 2e-41 seq40 150 4e-31 seq34 98.7 2e-15 >seq70 Length=181133 Score = 190 bits (210), Expect = 5e-43 Identities = 180/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||||||| || | || ||||| ||||| || ||||| ||||| ||||||||| Sbjct 22258 ATACCACCTCTTAGTCTCAAAACCAGATGCAATGTTGACTCTTTTTGAATGTTATAGTCA 22317 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 ||||||||||| || || || || || || || ||||| || | || ||||| ||||| Sbjct 22318 GATAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGT 22377 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||||||||| ||||| | ||||| || || | || || | ||| Sbjct 22378 GGGATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCA 22437 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| ||||||||||||||||||||||| || || ||||| |||||||| Sbjct 22438 ACCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 22487 Score = 185 bits (204), Expect = 2e-41 Identities = 179/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||||||| || | || ||||| || || || ||||| ||||| ||||||||| Sbjct 22486 ATACCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCA 22545 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 ||||||||||| || || || || || || || ||||| || | || ||||| ||||| Sbjct 22546 GATAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGT 22605 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||||||||| || ||||| | ||||| || || | || || | ||| Sbjct 22606 GGGATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCA 22665 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| ||||||||||||||||||||||| || || |||||||||||||| Sbjct 22666 ACCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 22715 Score = 176 bits (194), Expect = 1e-38 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||||| || || || ||||||| || || ||||| ||||| || |||||||| Sbjct 22033 CCACCTCTTAATCTTAGCACAAGATGTAGGGTCGACTCTTTTTGAATGTTGTAGTCAGAA 22092 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 |||||||| || || || ||||| || || ||||| || | |||||||| || || || Sbjct 22093 AGAGTTCTTCCATCCTCCAGTTGCTTACCTGCAAAGATCAATCTCTGTTGGTCGGGCGGA 22152 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || || || || ||||||||||| | ||| ||||| || | |||||| | ||| || Sbjct 22153 ATGCCCTCCTTGTCCTGAATCTTGGATTTGACATTGTCAATGGTATCAGAGGATTCAACT 22212 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||||||||||||||| ||||| || || ||||| |||||||| Sbjct 22213 TCGAGTGTAATAGTCTTACCGGTAAGAGTCTTAACAAAAATCTGCAT 22259 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||||||| || | || ||||| || || || ||||| ||||| ||||||||| Sbjct 22714 ATACCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCA 22773 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 ||||||||||| || || || || || || || ||||| || | || ||||| ||||| Sbjct 22774 GATAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGT 22833 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||||||||| || ||||| | ||||| || || | || || || || Sbjct 22834 GGGATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCC 22893 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||||| |||||||||||| || || | |||||| ||||| |||||||| Sbjct 22894 ACCTCTAATGTAATAGTCTTGCCGGTCAATGTTTTAACAAAAATCTGCAT 22943 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| || | || || |||| || ||||| || || ||||| || ||| Sbjct 22942 ATACCACCTCTTAATCTCAAAACGAGGTGTAGAGTTGATTCCTTTTGGATATTGTAATCA 23001 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| |||||| || || || | || || || || || || | || || |||||||| Sbjct 23002 GATAAAGTTCTGCCATCCTCCAACTGCTTACCTGCGAAGATCAATCTTTGCTGATCAGGT 23061 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||||||||| ||||| | ||||| || || | || || | ||| Sbjct 23062 GGGATGCCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCG 23121 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| ||||||||||||||||||||||| || || ||||| |||||||| Sbjct 23122 ACCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 23171 >seq103 Length=1149457 Score = 185 bits (204), Expect = 2e-41 Identities = 379/557 (68%), Gaps = 10/557 (2%) Strand=Plus/Plus Query 268745 TACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTA 268804 |||||| ||| | || ||||| ||||||| ||| || | || ||||| | || || Sbjct 422632 TACAAAAGGGCGGAGGCATCTTTCTGGACTGCAGAGGAGATTGACCTGTCGAAAGATATA 422691 Query 268805 ATAGATTGGAAAAATTTAAAACCAGAAG---AAAGAAGATTTATATCTTATATTCTTGCG 268861 | |||||| ||||| | |||||| | ||| ||||| ||| | || || Sbjct 422692 AATGATTGGGAAAATAGGATGACAGAAGGCGAGAGATTCTTTATGTCTAGAGTCCTAGCT 422751 Query 268862 TTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAG 268921 || ||||| | ||| || || || || || ||| |||| ||||| || | |||| Sbjct 422752 TTCTTTGCGGCATCTGACGGAATTGTCAATGAGAATTTAGTTGAGAATTTTTCCGCAGAG 422811 Query 268922 GTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCAT 268981 || ||||| || || |||| |||||| ||||| |||||||| || |||||||| ||| Sbjct 422812 GTTCAGATACCAGAGGCCAAATGTTTCTACGGGTTCCAGATCATGATGGAAAATATCCAT 422871 Query 268982 TCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGA 269041 || |||| ||| ||||||| || || || || | ||| || ||| | | Sbjct 422872 TCGGAGACTTACTCATTATTAATCGAGACATACATCAAGGATCCTAAGGAACGGGATTTC 422931 Query 269042 CTATTTTCTTCTAT-GAGAACTATGGACTGTG-TGAGaaaaaaaTCTGAATGGGCTCTGA 269099 | ||| | | || ||| || || || | | | |||| |||| |||||| | | Sbjct 422932 TTGTTTAATGCGATTGAGCAC-ATCC-CTCAGATCAAGGAAAAGGCTGAGTGGGCTATCA 422989 Query 269100 AATGGATAAACGATAGC---GCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAG 269156 ||||| | ||| | || | ||||| || ||| | || || |||||||| |||| Sbjct 422990 GGTGGATTCAAGATGACAATGCTCTTTACGCTGAGAGGCTGGTGGCATTTGCCGCAGTAG 423049 Query 269157 AAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTA 269216 ||||||| || || ||||| ||||||||||| ||||||||| | || || | ||||| | Sbjct 423050 AAGGTATCTTTTTCTCGGGATCTTTTGCCGCCATCTTTTGGCTCAAAAAGAAGGGCCTCA 423109 Query 269217 TGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACT 269276 ||||||| | || || || ||||| || || | || || ||||| || ||| |||| Sbjct 423110 TGCCAGGCCTGACCTTTTCAAACGAGTTAATCTGTAGAGATGAAGGATTGCACACAGACT 423169 Query 269277 TCGCTTGTTTATTATTT 269293 | |||||| || | ||| Sbjct 423170 TTGCTTGTCTAATGTTT 423186 >seq40 Length=692676 Score = 150 bits (166), Expect = 4e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| | ||||| || | || || |||||||| |||||||| ||||||||||| Sbjct 222421 CCACCTCTCAATCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGAC 222362 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | ||||| || || || | ||| || |||||||| || | ||||| |||||||| || Sbjct 222361 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGA 222302 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||||| || || |||||||||| || ||||| || | || || || || || Sbjct 222301 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGACT 222242 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || || |||||||||||||| || | || || || || |||||||| ||| Sbjct 222241 TCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCATCTTG 222191 >seq34 Length=390617 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || || || ||||| || || || || |||||||| | |||||| || || || | || Sbjct 329547 TGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCCTCCAACTGC 329606 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || ||||| ||||| | ||||| || ||||| || || || || || || |||||||| Sbjct 329607 TTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGGAATACCCTCCTTGTCTTGAATCTTA 329666 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535 | || ||||| || | || ||| | ||| ||||| | || || ||||||||||| Sbjct 329667 GACTTGACATTGTCAATAGTGTCGGAGGATTCGACCTCCAAAGTGATGGTCTTACCAGT 329725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151396851009340