Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq66 147 3e-30 seq38 98.7 1e-15 >seq66 Length=195892 Score = 147 bits (162), Expect = 3e-30 Identities = 304/449 (68%), Gaps = 29/449 (6%) Strand=Plus/Minus Query 6806 TTAATTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTAT 6865 ||| |||||| || | || | || ||||| || | ||| || || || | || | Sbjct 89934 TTAGTTGTTCCTTCAAGGCATCTACGTGATCCTTGTACACATGCGCGTCACCCATAGTGT 89875 Query 6866 GAATAAATTCACCTGGTTTCATATCAACAG-CTTGAGCAATTAAATATGTTAATAATGCA 6924 |||||||||| ||||| | ||| ||| ||| | ||||| || | || ||||| || Sbjct 89874 GAATAAATTCGCCTGGCTCCATGTCA-CAGACATGAGCTATCATTCGGGTCAATAAAGCG 89816 Query 6925 TAAGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGA 6984 ||||| || | |||||| || || |||| |||||| || |||||||||||| | | Sbjct 89815 TAAGATGCAATATTAAATGGGACGCCTAGTCCCATGTCGCATGATCTTTGATA----TAA 89760 Query 6985 CAAG-ATAAAATATT--GTCTA----------------TAGCATAAAATTGACACAATAC 7025 |||| || ||| || || | || |||||||||| | || || Sbjct 89759 CAAGCATGAAAGTTTTGGTTTCCCTTCCTTTGGGAAGCTAACATAAAATTGTGAAAACAC 89700 Query 7026 ATGACATGGAGGTAAAACAGCCTGATCT--ATATCAGATGGATTCCAAGCAGTCATTAAA 7083 ||| ||||| || || | | ||| | | ||| | |||||||||||| |||| | | Sbjct 89699 ATGGCATGGCGGCAATGC--CATGAGCGGAAAATCTGGTGGATTCCAAGCGCTCATAATA 89642 Query 7084 ATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATA 7143 || || ||||||| ||||| ||||| ||||| || | ||| | |||||| | | Sbjct 89641 ATTCGCCTATCATAAGGATTCGTTTTCAATTTGTGAATCACATCTTGCAGTTGATCAAAA 89582 Query 7144 CCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGA 7203 || || ||| ||||| | |||| | | || || || || || ||||||||||| Sbjct 89581 CCATGCCCTGTATAATCGTCGTCACAAGTCTTGTATTTTGCACCGAAGTGTCTCCATTGG 89522 Query 7204 AACCCATAAATAGGACCTAAATCACCTTC 7232 |||||||||| || |||||||||||||| Sbjct 89521 AACCCATAAACGGGTCCTAAATCACCTTC 89493 >seq38 Length=87492 Score = 98.7 bits (108), Expect = 1e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 19352 AAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGT 19411 || || ||| |||| ||||| || ||||| ||| | || || ||||| || |||| Sbjct 57794 AAGATTCCTCAAATTGGTGACAAATTTGCCTCTCGTCATGGCCAGAAAGGTACTATTGGT 57853 Query 19412 ATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATT 19471 || | |||| | ||||||||||||||| || ||| ||||| || || ||||| || Sbjct 57854 ATCACTTATAGCAGAGAAGATATGCCTTTCACAGCAGAAGGTATTGTTCCTGATCTAATC 57913 Query 19472 ATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503 |||||||||||||| ||||| ||| ||||| Sbjct 57914 ATTAACCCACATGCCATTCCATCTCGTATGAC 57945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871217918000