Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06-
15] 105 sequences; 10,772,966 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq70 149 6e-31
seq40 149 6e-31
seq34 132 4e-26
>seq70
Length=181133
Score = 149 bits (164), Expect = 6e-31
Identities = 180/245 (73%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| | | || || ||||| |||| ||| || | ||| | ||| ||||||||||| |
Sbjct 22932 AAAAATCTGCATACCACCTCTTAATCTCAAAACGAGGTGTAGAGTTGATTCCTTTTGGAT 22991
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
|| ||||| | ||| || |||||||| ||| || || | ||||| ||||||||
Sbjct 22992 ATTGTAATCAGATAAAGTTCTGCCATCCTCCAACTGCTTACCTGCGAAGATCAATCTTTG 23051
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
|||||| || || || |||||||| || | || || | ||| ||| | ||| ||||||
Sbjct 23052 CTGATCAGGTGGGATGCCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTC 23111
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | ||||| |||| || || || || ||||||||||| || ||||| ||||||||
Sbjct 23112 AGAGGATTCGACCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 23171
Query 95008 GCTTA 95012
|| ||
Sbjct 23172 GCCTA 23176
Score = 140 bits (154), Expect = 3e-28
Identities = 175/240 (73%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| | | || || ||||| | || ||| |||| |||||||| || || ||||| |
Sbjct 22476 AAAAATCTGCATACCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAAT 22535
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
|||||| || | ||| | |||||||||||| || || ||||||| ||||||||
Sbjct 22536 GTTATAGTCAGATAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTG 22595
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
|| || || || ||||||||||| || | || || | ||| ||| | ||| ||||||
Sbjct 22596 TTGGTCAGGTGGGATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTC 22655
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || || |||| || || || || ||||||||||| || ||||| ||||||||
Sbjct 22656 AGAGGATTCAACCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 22715
Score = 136 bits (150), Expect = 4e-27
Identities = 174/240 (73%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| | | || || ||||| | || ||| |||| ||||| || || || ||||| |
Sbjct 22248 AAAAATCTGCATACCACCTCTTAGTCTCAAAACCAGATGCAATGTTGACTCTTTTTGAAT 22307
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
|||||| || | ||| | |||||||||||| || || ||||||| ||||||||
Sbjct 22308 GTTATAGTCAGATAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTG 22367
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
|| || || || ||||||||||| || | || || | ||| ||| | ||| ||||||
Sbjct 22368 TTGGTCAGGTGGGATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTC 22427
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || || |||| || || || || ||||||||||| || ||||| ||||||||
Sbjct 22428 AGAGGATTCAACCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 22487
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| | || ||| |||| |||||||| || || ||||| | |||||| ||
Sbjct 22717 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 22776
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | |||||||||||| || || ||||||| |||||||| || || || ||
Sbjct 22777 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 22836
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
||||||||||| || | || || | ||| ||| | ||| |||||||| || ||
Sbjct 22837 ATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACC 22896
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || || || || || || | ||||| ||||| ||||||||
Sbjct 22897 TCTAATGTAATAGTCTTGCCGGTCAATGTTTTAACAAAAATCTGCAT 22943
>seq40
Length=692676
Score = 149 bits (164), Expect = 6e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| | |||||||||||| ||||||||||| || | |||||| || |
Sbjct 222421 CCACCTCTCAATCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGAC 222362
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || || |||||||| || || || ||||||| ||||| |||||||| || |||
Sbjct 222361 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGA 222302
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | ||| |||| |||||| | ||| |||||||| |||||
Sbjct 222301 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGACT 222242
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| || || || || || || | || || || || ||||||||
Sbjct 222241 TCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCAT 222195
>seq34
Length=390617
Score = 132 bits (146), Expect = 4e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| ||| ||||||||||| || ||||||||||| | ||| || || |
Sbjct 329523 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 329582
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| || |||||||| ||| || || | || || ||||| ||||| || || |||
Sbjct 329583 AAAGTTCTGCCATCCTCCAACTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGGA 329642
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
||||| || ||||| | ||| || | |||||| | | | |||||| | | |||||
Sbjct 329643 ATACCCTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCGGAGGATTCGACC 329702
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998
|| | |||||||| || ||||| | ||| || || ||
Sbjct 329703 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 329740
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448290611617800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |