Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq70 149 6e-31 seq40 149 6e-31 seq34 132 4e-26 >seq70 Length=181133 Score = 149 bits (164), Expect = 6e-31 Identities = 180/245 (73%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || ||||| |||| ||| || | ||| | ||| ||||||||||| | Sbjct 22932 AAAAATCTGCATACCACCTCTTAATCTCAAAACGAGGTGTAGAGTTGATTCCTTTTGGAT 22991 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 || ||||| | ||| || |||||||| ||| || || | ||||| |||||||| Sbjct 22992 ATTGTAATCAGATAAAGTTCTGCCATCCTCCAACTGCTTACCTGCGAAGATCAATCTTTG 23051 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 |||||| || || || |||||||| || | || || | ||| ||| | ||| |||||| Sbjct 23052 CTGATCAGGTGGGATGCCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTC 23111 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||||| |||| || || || || ||||||||||| || ||||| |||||||| Sbjct 23112 AGAGGATTCGACCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 23171 Query 95008 GCTTA 95012 || || Sbjct 23172 GCCTA 23176 Score = 140 bits (154), Expect = 3e-28 Identities = 175/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || ||||| | || ||| |||| |||||||| || || ||||| | Sbjct 22476 AAAAATCTGCATACCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAAT 22535 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 |||||| || | ||| | |||||||||||| || || ||||||| |||||||| Sbjct 22536 GTTATAGTCAGATAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTG 22595 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 || || || || ||||||||||| || | || || | ||| ||| | ||| |||||| Sbjct 22596 TTGGTCAGGTGGGATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTC 22655 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || |||| || || || || ||||||||||| || ||||| |||||||| Sbjct 22656 AGAGGATTCAACCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 22715 Score = 136 bits (150), Expect = 4e-27 Identities = 174/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || ||||| | || ||| |||| ||||| || || || ||||| | Sbjct 22248 AAAAATCTGCATACCACCTCTTAGTCTCAAAACCAGATGCAATGTTGACTCTTTTTGAAT 22307 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 |||||| || | ||| | |||||||||||| || || ||||||| |||||||| Sbjct 22308 GTTATAGTCAGATAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTG 22367 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 || || || || ||||||||||| || | || || | ||| ||| | ||| |||||| Sbjct 22368 TTGGTCAGGTGGGATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTC 22427 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || |||| || || || || ||||||||||| || ||||| |||||||| Sbjct 22428 AGAGGATTCAACCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 22487 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || ||| |||| |||||||| || || ||||| | |||||| || Sbjct 22717 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 22776 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | |||||||||||| || || ||||||| |||||||| || || || || Sbjct 22777 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 22836 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||||||||| || | || || | ||| ||| | ||| |||||||| || || Sbjct 22837 ATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACC 22896 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || || || || || | ||||| ||||| |||||||| Sbjct 22897 TCTAATGTAATAGTCTTGCCGGTCAATGTTTTAACAAAAATCTGCAT 22943 >seq40 Length=692676 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| | |||||||||||| ||||||||||| || | |||||| || | Sbjct 222421 CCACCTCTCAATCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGAC 222362 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || || |||||||| || || || ||||||| ||||| |||||||| || ||| Sbjct 222361 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGA 222302 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||| ||||| | ||| |||| |||||| | ||| |||||||| ||||| Sbjct 222301 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGACT 222242 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || || || || || || | || || || || |||||||| Sbjct 222241 TCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCAT 222195 >seq34 Length=390617 Score = 132 bits (146), Expect = 4e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||| ||||||||||| || ||||||||||| | ||| || || | Sbjct 329523 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 329582 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| || |||||||| ||| || || | || || ||||| ||||| || || ||| Sbjct 329583 AAAGTTCTGCCATCCTCCAACTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGGA 329642 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||| || ||||| | ||| || | |||||| | | | |||||| | | ||||| Sbjct 329643 ATACCCTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCGGAGGATTCGACC 329702 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998 || | |||||||| || ||||| | ||| || || || Sbjct 329703 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 329740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290611617800