Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq70 95.1 1e-14 seq40 89.7 5e-13 >seq70 Length=181133 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| |||||||| || || || | || || | || | || || Sbjct 22943 ATGCAGATTTTTGTTAAAACATTGACCGGCAAGACTATTACATTAGAGGTGGAGTCTTCT 22884 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || ||||| || |||||||| || || || || ||| Sbjct 22883 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 22824 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | || | | || || || || || |||| |||| | ||||||||| Sbjct 22823 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22764 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||| || ||| | |||||||| ||||||| ||||| || Sbjct 22763 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGG 22717 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || | ||||| || | || || | || | ||||| Sbjct 22715 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 22656 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || ||||| || |||||||| || || || || ||| Sbjct 22655 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 22596 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | || | | || || || || || |||| |||| | ||||||||| Sbjct 22595 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22536 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||| || ||| | |||||||| ||||||| ||||| || Sbjct 22535 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGG 22489 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || | || || || | || || ||||| | ||||| Sbjct 22259 ATGCAGATTTTTGTTAAGACTCTTACCGGTAAGACTATTACACTCGAAGTTGAATCCTCT 22200 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | |||||| |||||| ||||| || || || || ||||| ||| Sbjct 22199 GATACCATTGACAATGTCAAATCCAAGATTCAGGACAAGGAGGGCATTCCGCCCGACCAA 22140 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||| | || | | || || ||||| || |||| |||| | ||||| ||| Sbjct 22139 CAGAGATTGATCTTTGCAGGTAAGCAACTGGAGGATGGAAGAACTCTTTCTGACTACAAC 22080 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||| || || | ||||| || || ||| | ||||| || Sbjct 22079 ATTCAAAAAGAGTCGACCCTACATCTTGTGCTAAGATTAAGAGGTGG 22033 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || | ||||| || | || || | || | ||||| Sbjct 22487 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 22428 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || ||||| || |||||||| || || || || ||| Sbjct 22427 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 22368 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | || | | || || || || || |||| |||| | ||||||||| Sbjct 22367 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22308 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||| || || | |||||||| ||||||| ||||| || Sbjct 22307 ATTCAAAAAGAGTCAACATTGCATCTGGTTTTGAGACTAAGAGGTGG 22261 >seq40 Length=692676 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 26762 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA 26821 || ||| ||||| | || || || || || || || || | || ||| | ||| | || Sbjct 222188 AACCAAGATGCAGATTTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTTGAAGTCGA 222247 Query 26822 ATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCC 26881 || ||||| ||||| | ||||| ||||||| ||||| ||||| || || || Sbjct 222248 GTCTTCTGACACTATCGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACC 222307 Query 26882 CGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGA 26941 ||||| || ||| | || | | || || ||| | || |||| |||| | | || Sbjct 222308 TGATCAGCAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGA 222367 Query 26942 CTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||||||| || |||||||| | || |||| || ||| | ||||| || Sbjct 222368 CTATAACATTCAGAAGGAATCTACCTTGCACTTGGTGCTTAGATTGAGAGGTGG 222421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478661771755600