Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq103 145 7e-30 seq40 125 6e-24 seq70 107 2e-18 seq34 87.8 2e-12 >seq103 Length=1149457 Score = 145 bits (160), Expect = 7e-30 Identities = 380/572 (66%), Gaps = 37/572 (6%) Strand=Plus/Minus Query 104608 TTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAAGGATTC 104667 |||||||| || ||||| || || |||| |||||||| | |||||| || || ||||| Sbjct 423446 TTTTCAAAGAAGTTAGTTTTTCCTGCCAGCGAAATATTTTCCATAAAGTCAAACGGATTA 423387 Query 104668 AAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCGATCCGCCACAAATTCG 104727 | || || ||||| | || ||||| ||| || ||| | || || ||||| || Sbjct 423386 GTAACATTGAAGTATTTCTTGTTCCCAAGAGCGACCAGCAGCCTGTCTGCTACAAACTCA 423327 Query 104728 ATGTACTCGCACAT-AGAATGTGCATTCATGCCCAGCATTGCGACGGGTAAAGCGTTAGT 104786 | ||||| ||| || | |||||||||||||||| || ||||| | |||| | Sbjct 423326 ACGTACTGATTCATCAGCGCG-GCATTCATGCCCAGCAGAGCCACGGGGAGCGCGTCGAT 423268 Query 104787 aaaaaaaTCTTTCTCGATGTCCACGGCTTCCTTAAACATGTTCAGCACCTTGCTTTCAGA 104846 ||| | ||||||||| || || ||||| ||| || || | | | |||| Sbjct 423267 GAAATACCTTTTCTCGATCTCGACAGCTTCTGTAA---TGATCCTTTCAATAATATCAGG 423211 Query 104847 AA---GCTTGTCCTCTT---TGGCAATATATTTGTTGTAATAGAGGCAGGCAAAGTCTGT 104900 | |||||| |||| ||| || | ||| || || ||||||||||| Sbjct 423210 ATCAGGCTTGTT-TCTTAGATGGGAAAACATT-----------AGACAAGCAAAGTCTGT 423163 Query 104901 GTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGTAA--GTCAAGCCAGGTA-GAGC 104957 ||||||||||||||||||| | || | ||||| || || |||| ||| || | ||| Sbjct 423162 GTGCAATCCTTCATCTCTACAGATTAACTCGTT--TGAAAAGGTCAGGCCTGGCATGAGG 423105 Query 104958 CCCtt-tttttGTGTCTTTAATATAGTAGATGGCAGCAAAACTACCGGAGAAAAAGACAC 105016 ||||| |||||| | | | ||||||| |||||| || |||||||||| || Sbjct 423104 CCCTTCTTTTTGAGCC--------AAAAGATGGCGGCAAAAGATCCCGAGAAAAAGATAC 423053 Query 105017 CTTCGACGATGGCAAACGCGACCATGCGTTCGGCGAATGTAGCAGTTTGACTTTCAATCC 105076 |||| || |||||| || |||| | || ||| | |||| | | | || ||||| Sbjct 423052 CTTCTACTGCGGCAAATGCCACCAGCCTCTCAGCGTAAAGAGCATTGTCATCTTGAATCC 422993 Query 105077 ATTTCTGAGCCCATGTTGCCTTCCGTTTGACGCTATCAATGTGCTCGATGGCATTCAAAA 105136 | | |||||| ||||| |||| | |||||||| || ||||| || | Sbjct 422992 ACCTGATAGCCCACTCAGCCTTTTCCTTGATCTGAGGGATGTGCTCAATCGCATTAAACA 422933 Query 105137 TCCTGTCGCATTCCTGAGGATCTTTAATGTAT 105168 || | ||||| |||||| || |||||| Sbjct 422932 AGAAATCCCGTTCCTTAGGATCCTTGATGTAT 422901 >seq40 Length=692676 Score = 125 bits (138), Expect = 6e-24 Identities = 168/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043 || ||| ||||| | || || || || || || || || | |||||| | |||||||| Sbjct 222188 AACCAAGATGCAGATTTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTTGAAGTCGA 222247 Query 24044 GGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCC 24103 | | ||||| ||||| | ||||| ||||||| ||||| ||||| || || || Sbjct 222248 GTCTTCTGACACTATCGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACC 222307 Query 24104 CGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGA 24163 ||||| |||||| |||| | | || |||||| | || |||| ||||| | | || Sbjct 222308 TGATCAGCAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGA 222367 Query 24164 TTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||||||| || |||||||| | || || ||| | ||||||||||| || Sbjct 222368 CTATAACATTCAGAAGGAATCTACCTTGCACTTGGTGCTTAGATTGAGAGGTGG 222421 >seq70 Length=181133 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | || || || | ||||| ||||||| || || Sbjct 22259 ATGCAGATTTTTGTTAAGACTCTTACCGGTAAGACTATTACACTCGAAGTTGAATCCTCT 22200 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | |||||| |||||| ||||| || ||||| || ||||| ||| Sbjct 22199 GATACCATTGACAATGTCAAATCCAAGATTCAGGACAAGGAGGGCATTCCGCCCGACCAA 22140 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | | || |||||||| || |||| |||| | || || ||| Sbjct 22139 CAGAGATTGATCTTTGCAGGTAAGCAACTGGAGGATGGAAGAACTCTTTCTGACTACAAC 22080 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||||||| || || | ||| | ||| ||||||| ||||| || Sbjct 22079 ATTCAAAAAGAGTCGACCCTACATCTTGTGCTAAGATTAAGAGGTGG 22033 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| |||||||| || || || | ||||| | || || ||| | Sbjct 22943 ATGCAGATTTTTGTTAAAACATTGACCGGCAAGACTATTACATTAGAGGTGGAGTCTTCT 22884 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || ||||| || |||||||| || || || || ||| Sbjct 22883 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 22824 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||| | | || ||||| || || |||| |||| | || |||||| Sbjct 22823 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22764 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||||||| || || | ||| | || || ||| | ||||| || Sbjct 22763 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGG 22717 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | ||||| | || ||||| || Sbjct 23171 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTCGAATCCTCT 23112 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || ||||| || ||||||||||| || || ||||| Sbjct 23111 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGCATCCCACCTGATCAG 23052 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 || ||| |||| | || || ||||| | || |||| ||| ||| | | | ||||| || Sbjct 23051 CAAAGATTGATCTTCGCAGGTAAGCAGTTGGAGGATGGCAG-AACTTTATCTGATTACAA 22993 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| ||||| || | || | || || ||||| ||||| || Sbjct 22992 TATCCAAAAGGAATCAACTCTACACCTCGTTTTGAGATTAAGAGGTGG 22945 >seq34 Length=390617 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 || || || || || ||||| || | || || | || ||||| || |||||| || Sbjct 329740 TTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCCGACACTATT 329681 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | ||||| |||||| ||||| || || || || || || || |||||| || Sbjct 329680 GACAATGTCAAGTCTAAGATTCAAGACAAGGAGGGTATTCCACCTGACCAGCAGAGATTG 329621 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 |||| || || ||||| | || |||| ||||| | || || ||||| ||||| Sbjct 329620 ATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCTGACTACAACATCCAAAAG 329561 Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || | || || || || ||||||||||| || Sbjct 329560 GAATCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 329523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935449816275