Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq40 105 4e-18 seq98 104 2e-17 seq70 95.1 8e-15 >seq40 Length=692676 Score = 105 bits (116), Expect = 4e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||||||||| | | |||||| || | || ||||| ||||| || || ||||| Sbjct 222422 ACCACCTCTCAATCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGA 222363 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 ||| | | || || ||||| || || ||||| || | | || ||||| | || Sbjct 222362 CAAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGG 222303 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 | ||||| ||||| ||| ||| ||| ||||| | || ||| || | || || Sbjct 222302 AATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGAC 222243 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 ||| | |||||||| |||||||||||||| || ||||| |||||||| || Sbjct 222242 TTCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCATCTT 222192 >seq98 Length=1814 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| | Sbjct 288 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 229 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 228 GCCAATATTTAGCTTTA 212 >seq70 Length=181133 Score = 95.1 bits (104), Expect = 8e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| || | ||| || | || ||||| |||||||| ||||||||||||| Sbjct 22943 TACCACCTCTTAATCTCAAAACGAGGTGTAGAGTTGATTCCTTTTGGATATTGTAATCAG 23002 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | ||| | | || || || || || || || || || | | ||| ||||| | | Sbjct 23003 ATAAAGTTCTGCCATCCTCCAACTGCTTACCTGCGAAGATCAATCTTTGCTGATCAGGTG 23062 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||||||| ||| || || ||| || || | || ||| || ||| | Sbjct 23063 GGATGCCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCGA 23122 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 | || | ||||||||| ||||| || | || || || || ||||||||| Sbjct 23123 CCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCATG 23172 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| | | ||| |||| ||| | ||| ||| |||||||| || || |||| Sbjct 22715 TACCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAG 22774 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | | | | || || | || || || ||||| || | | |||||| || | | Sbjct 22775 ATAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTG 22834 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| |||||||| || || || ||| || || | || ||| || | || | Sbjct 22835 GGATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCA 22894 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | |||||||||||||| || || ||||| ||||| || || |||||||| Sbjct 22895 CCTCTAATGTAATAGTCTTGCCGGTCAATGTTTTAACAAAAATCTGCAT 22943 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| | | ||| |||| ||| | ||| ||| |||||||| || || |||| Sbjct 22487 TACCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAG 22546 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | | | | || || | || || || ||||| || | | |||||| || | | Sbjct 22547 ATAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTG 22606 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| |||||||| || || || ||| || || | || ||| || ||||| Sbjct 22607 GGATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAA 22666 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | ||||||||| ||||| || | || || || ||||||||||| Sbjct 22667 CCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 22715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946771372255