Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq70 123 2e-23 seq40 114 1e-20 seq34 98.7 9e-16 >seq70 Length=181133 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| | |||||||| | || ||| ||||||| || || ||| Sbjct 22259 ATGCAGATTTTTGTTAAGACTCTTACCGGTAAGACTATTACACTCGAAGTTGAATCCTCT 22200 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || || || || | || | ||| ||||| || || ||||| || ||| Sbjct 22199 GATACCATTGA--CAATGTCAAATCCAAGATTCAG-GACAAGGAGGGCATTCCGCCCGAC 22143 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||| | | || ||||| || || ||| | || |||| | ||| | || ||| Sbjct 22142 CAACAGAGATTGATCTTTGCAGGTAAGCAACTGGAGGATGGAAGAACTCTTTCTGACTAC 22083 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||||||||| || || |||||| | |||||||| ||||||| || Sbjct 22082 AACATTCAAAAAGAGTCGACCCTACATCTTGTGCTAAGATTAAGAGGTGG 22033 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || |||||||| || | || ||| | || |||||||| ||| Sbjct 22943 ATGCAGATTTTTGTTAAAACATTGACCGGCAAGACTATTACATTAGAGGTGGAGTCTTCT 22884 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| || |||||||| || |||||||||||| Sbjct 22883 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 22824 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || | | || ||||| || || || | || |||| | ||| | || || || Sbjct 22823 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22764 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||| || || | ||| | || | || |||||||| || Sbjct 22763 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGG 22717 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||| |||||| | || ||||| | || ||| | || || || || ||| Sbjct 22715 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 22656 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| || |||||||| || |||||||||||| Sbjct 22655 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 22596 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || | | || ||||| || || || | || |||| | ||| | || || || Sbjct 22595 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22536 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||| || || | ||| | || | || |||||||| || Sbjct 22535 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGG 22489 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| | || ||||| | || ||| | || || || || ||| Sbjct 22487 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 22428 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| || |||||||| || |||||||||||| Sbjct 22427 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 22368 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || | | || ||||| || || || | || |||| | ||| | || || || Sbjct 22367 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22308 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||| || || | ||| | || | || |||||||| || Sbjct 22307 ATTCAAAAAGAGTCAACATTGCATCTGGTTTTGAGACTAAGAGGTGG 22261 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| | || ||||| | || ||| | || || || || ||| Sbjct 23171 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTCGAATCCTCT 23112 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| || |||||||| || |||||||| || Sbjct 23111 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGCATCCCACCTGATCAG 23052 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || | | || || || || || || || || |||| | ||| | ||||||||| Sbjct 23051 CAAAGATTGATCTTCGCAGGTAAGCAGTTGGAGGATGGCAGAACTTTATCTGATTACAAT 22992 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| ||||| || ||||| | || | || ||||||| || Sbjct 22991 ATCCAAAAGGAATCAACTCTACACCTCGTTTTGAGATTAAGAGGTGG 22945 >seq40 Length=692676 Score = 114 bits (126), Expect = 1e-20 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| ||||| | || || | ||||| ||||| ||| Sbjct 222195 ATGCAGATTTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTTGAAGTCGAGTCTTCT 222254 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||||||||| || || ||| |||| | ||| ||||| ||||| ||||||||||| Sbjct 222255 GACACTATCGA--CAATGTCAAGTCAAAGATTCA-AGACAAGGAAGGTATTCCACCTGAT 222311 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| | | || ||||| || || ||||| || |||| | || || || || Sbjct 222312 CAGCAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTAT 222371 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| || ||||| || | || || ||||| || | ||||| || Sbjct 222372 AACATTCAGAAGGAATCTACCTTGCACTTGGTGCTTAGATTGAGAGGTGG 222421 >seq34 Length=390617 Score = 98.7 bits (108), Expect = 9e-16 Identities = 139/191 (73%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||||||||| ||||| ||||||| | || || || || || |||||||| Sbjct 329740 TTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCCGACACTATT 329681 Query 25068 GAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124 || || || ||| | || | ||| ||||| || || |||||||||||||| ||| | Sbjct 329680 GA--CAATGTCAAGTCTAAGATTCAA-GACAAGGAGGGTATTCCACCTGACCAGCAGAGA 329624 Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184 | ||||| || || || || || || |||| | ||| || || ||||| || ||| Sbjct 329623 TTGATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCTGACTACAACATCCAA 329564 Query 25185 AAAGAATCCAC 25195 || |||||||| Sbjct 329563 AAGGAATCCAC 329553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327445475575