Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq70 122 2e-22 seq40 86.0 1e-11 >seq70 Length=181133 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||| | || |||||||| || |||||||| | Sbjct 22261 CCACCTCTTAGTCTCAAAACCAGATGCAATGTTGACTCTTTTTGAATGTTATAGTCAGAT 22320 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| || || | || || ||||| ||||||| | ||||| | |||| Sbjct 22321 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 22380 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||||||||||||||| |||| || ||||| || |||| || ||||| || Sbjct 22381 ATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACC 22440 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| || || |||||||| || || |||||||| Sbjct 22441 TCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 22487 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||| | || |||||||| || |||||||| | Sbjct 22489 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 22548 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| || || | || || ||||| ||||||| | ||||| | |||| Sbjct 22549 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 22608 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||||||||| ||||| |||| || ||||| || |||| || ||||| || Sbjct 22609 ATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACC 22668 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| || || |||||||| || ||||||||||| Sbjct 22669 TCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 22715 Score = 116 bits (128), Expect = 9e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||||||||| || || | | || | || || || || || || |||||||| Sbjct 22980 TTCCTTTTGGATATTGTAATCAGATAAAGTTCTGCCATCCTCCAACTGCTTACCTGCGAA 23039 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | || ||| | |||||| ||||||||||||||||| |||| || ||||| Sbjct 23040 GATCAATCTTTGCTGATCAGGTGGGATGCCTTCTTTATCCTGGATCTTCGACTTTACGTT 23099 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || ||||| || || || || || ||||| || || |||||||| || Sbjct 23100 GTCGATAGTGTCAGAGGATTCGACCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAAC 23159 Query 288462 GAATATCTGCAT 288473 || |||||||| Sbjct 23160 AAAAATCTGCAT 23171 Score = 104 bits (114), Expect = 6e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||| | || |||||||| || |||||||| | Sbjct 22717 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 22776 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| || || | || || ||||| ||||||| | ||||| | |||| Sbjct 22777 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 22836 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||||||||| ||||| |||| || ||||| || |||| || || || || Sbjct 22837 ATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACC 22896 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || || ||||| ||||||| || || || || |||||||| Sbjct 22897 TCTAATGTAATAGTCTTGCCGGTCAATGTTTTAACAAAAATCTGCAT 22943 >seq40 Length=692676 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || || |||||||| | | || | || || || ||||| || || || || Sbjct 222386 TTCCTTCTGAATGTTATAGTCAGACAAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAA 222327 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | ||| ||| | ||| || ||||| || || || || || | || || || Sbjct 222326 GATCAATCTCTGCTGATCAGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTTGACATT 222267 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || || || ||||| || || || ||||| || |||| |||||||| Sbjct 222266 GTCGATAGTGTCAGAAGACTCGACTTCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGAC 222207 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 222206 GAAAATCTGCAT 222195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179652812996190