Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq70 96.9 3e-15 seq40 93.3 4e-14 >seq70 Length=181133 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285 ||||| ||||| ||||| | ||||| ||||||||||||||||| || | | || | Sbjct 22042 AATCTTAGCACAAGATGTAGGGTCGACTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTT 22101 Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345 | || || || ||||| || ||| | || | | ||| |||||||| ||||| || || Sbjct 22102 CCATCCTCCAGTTGCTTACCTGCAAAGATCAATCTCTGTTGGTCGGGCGGAATGCCCTCC 22161 Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405 || || || || || || ||| || | |||||| || || ||||| | || Sbjct 22162 TTGTCCTGAATCTTGGATTTGACATTGTCAATGGTATCAGAGGATTCAACTTCGAGTGTA 22221 Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | ||||| ||||| | ||| || || ||||| ||||| Sbjct 22222 ATAGTCTTACCGGTAAGAGTCTTAACAAAAATCTGCAT 22259 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||| | || || |||||||||||||| || || | | || | | || || Sbjct 22735 ACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTTCCATCCTCC 22794 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 |||||||| || ||| | || | | || ||||| || || || |||||||| ||||| Sbjct 22795 AGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTATCTTGG 22854 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 || || |||||| || | || ||| | ||||| |||| || | |||||| Sbjct 22855 ATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACCTCTAATGTAATAGTCTTG 22914 Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| ||||| || ||||| ||||| Sbjct 22915 CCGGTCAATGTTTTAACAAAAATCTGCAT 22943 >seq40 Length=692676 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||||||||| | || | || ||||| || |||||||| || || | Sbjct 222422 ACCACCTCTCAATCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGA 222363 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | | || || | ||||| || ||| | || | | |||||| || || || Sbjct 222362 CAAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGG 222303 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || ||| ||| ||| || | || ||| | || || Sbjct 222302 AATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGAC 222243 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||| | || | ||||| || ||||| || || |||||||| ||||| || Sbjct 222242 TTCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCATCTT 222192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644144216200