Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq70 104 2e-17 seq40 93.3 4e-14 >seq70 Length=181133 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | ||||| | ||| | ||||| || |||||||||||||| ||||| || Sbjct 22033 CCACCTCTTAATCTTAGCACAAGATGTAGGGTCGACTCTTTTTGAATGTTGTAGTCAGAA 22092 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || || || || || || ||||||||| ||| || ||||| || Sbjct 22093 AGAGTTCTTCCATCCTCCAGTTGCTTACCTGCAAAGATCAATCTCTGTTGGTCGGGCGGA 22152 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || || |||| | || | ||| || | || ||| Sbjct 22153 ATGCCCTCCTTGTCCTGAATCTTGGATTTGACATTGTCAATGGTATCAGAGGATTCAACT 22212 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || || ||||| ||||| || |||||||||||||| Sbjct 22213 TCGAGTGTAATAGTCTTACCGGTAAGAGTCTTAACAAAAATCTGCAT 22259 Score = 100 bits (110), Expect = 3e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | ||||| ||| || | |||| || || || ||||| ||||||||||| Sbjct 22945 CCACCTCTTAATCTCAAAACGAGGTGTAGAGTTGATTCCTTTTGGATATTGTAATCAGAT 23004 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || | ||| || || ||| ||||||||| |||||||| || || Sbjct 23005 AAAGTTCTGCCATCCTCCAACTGCTTACCTGCGAAGATCAATCTTTGCTGATCAGGTGGG 23064 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| || || ||| ||| ||| ||| | ||||| ||| ||||| | ||||| Sbjct 23065 ATGCCTTCTTTATCCTGGATCTTCGACTTTACGTTGT-CGATAGTGTCAGAGGATTCGAC 23123 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || | || | || || || || ||||| || ||||||||||||||| || Sbjct 23124 CTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCATGCCT 23175 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | || || ||| |||| ||| | || |||||||||||||| || || || Sbjct 22717 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 22776 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || ||||| || || || ||||||||| || || || || || Sbjct 22777 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 22836 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || || || || ||| ||| ||| | ||||| ||| ||||| | | ||| || Sbjct 22837 ATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGT-CGATAGTGTCAGAAGACTCCAC 22895 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || |||||||||| ||||| |||||||||||||| Sbjct 22896 CTCTAATGTAATAGTCTTGCCGGTCAATGTTTTAACAAAAATCTGCAT 22943 >seq40 Length=692676 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | |||| | |||||| || | ||||| || || ||||| || || || | Sbjct 222421 CCACCTCTCAATCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGAC 222362 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || | || || ||||| ||||||||| ||||||||| || || Sbjct 222361 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGA 222302 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || |||||||| ||| | | || ||||| | |||| ||||| | | |||||| Sbjct 222301 ATACCTTCCTTGTCT-TGAATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGAC 222243 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | ||| | || || || |||| || || || ||||||||||| Sbjct 222242 TTCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCAT 222195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500175905200