Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq70 131 2e-25 seq40 107 2e-18 seq34 86.0 6e-12 >seq70 Length=181133 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || || || || |||||||||||||||||||| ||||| | ||| | | Sbjct 22957 CTCAAAACGAGGTGTAGAGTTGATTCCTTTTGGATATTGTAATCAGATAAAGTTCTGCCA 23016 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||| || || |||||| | ||||||| |||||| || || || |||||||||||| Sbjct 23017 TCCTCCAACTGCTTACCTGCGAAGATCAATCTTTGCTGATCAGGTGGGATGCCTTCTTTA 23076 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 || || || || || | || | || | ||||| || || ||||| || || |||| Sbjct 23077 TCCTGGATCTTCGACTTTA-CGTTGTCGATAGTGTCAGAGGATTCGACCTCAAGTGTAAT 23135 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || ||||| || |||||||| ||||| Sbjct 23136 AGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 23171 Score = 113 bits (124), Expect = 4e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 || ||||| || ||||||| ||||| || ||||| || ||||| || | ||| | Sbjct 22726 AGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTT 22785 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 ||| |||| || || ||||| | ||||||| ||| ||||| || || || |||||| Sbjct 22786 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCT 22845 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301 |||||||| || || || | || | || | ||||| |||||||| || || | || Sbjct 22846 TTATCTTGGATCTTCGACTTTA-CGTTGTCGATAGTGTCAGAAGACTCCACCTCTAATGT 22904 Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || |||||||| | ||||| |||||||| ||||| Sbjct 22905 AATAGTCTTGCCGGTCAATGTTTTAACAAAAATCTGCAT 22943 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| ||||| || || || || ||||| || || || || | ||| | ||| || Sbjct 22050 CACAAGATGTAGGGTCGACTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCCATCCTC 22109 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 || ||| || ||||| | ||||||| || ||||| ||||||||||| || || || || Sbjct 22110 CAGTTGCTTACCTGCAAAGATCAATCTCTGTTGGTCGGGCGGAATGCCCTCCTTGTCCTG 22169 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 ||| || ||||| || | ||| || || || || |||||||| |||| || || Sbjct 22170 AATCTTGGATTTGACATTGTCAATGGTATCAGAGGATTCAACTTCGAGTGTAATAGTCTT 22229 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||| || |||||||| ||||| Sbjct 22230 ACCGGTAAGAGTCTTAACAAAAATCTGCAT 22259 Score = 100 bits (110), Expect = 3e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 || ||||| || ||||||| ||||| || ||||| || ||||| || | ||| | Sbjct 22270 AGTCTCAAAACCAGATGCAATGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTT 22329 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 ||| |||| || || ||||| | ||||||| ||| ||||| || || || |||||| Sbjct 22330 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCT 22389 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301 ||||| || || || || | || | || | ||||| || || || || || || || Sbjct 22390 TTATCCTGGATCTTCGACTTTA-CGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGT 22448 Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || ||||| || |||||||| ||||| Sbjct 22449 AATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 22487 Score = 100 bits (110), Expect = 3e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 || ||||| || ||||||| ||||| || ||||| || ||||| || | ||| | Sbjct 22498 AGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTT 22557 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 ||| |||| || || ||||| | ||||||| ||| ||||| || || || |||||| Sbjct 22558 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCT 22617 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301 |||||||| || || || | || | || | ||||| || || || || || || || Sbjct 22618 TTATCTTGGATCTTCGACTTTA-CGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGT 22676 Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || ||||| || ||||| || ||||| Sbjct 22677 AATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 22715 >seq40 Length=692676 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 |||| || |||||||| || || ||||| || | |||| | ||| |||||||| Sbjct 222397 TGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGACAAGGTTCTGCCATCCTCCAATTGC 222338 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | ||||||| ||||| || || ||||| ||||| || |||||||| ||| Sbjct 222337 TTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGAATACCTTCCTTGTCTTGAATCTTT 222278 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 |||| || | ||||| |||||||||||||| || |||| || || || || Sbjct 222277 GACTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGGGTAATAGTCTTACCCGTC 222218 Query 45318 AGAGTTTTTACAAAAATTTGCATC 45341 | || || || ||||| |||||| Sbjct 222217 AAGGTCTTGACGAAAATCTGCATC 222194 >seq34 Length=390617 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | |||| || |||||||||||||| || || || | ||| | | Sbjct 329535 CTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCA 329594 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||| || || || ||| | ||||||| |||||||| || ||||| || || || Sbjct 329595 TCCTCCAACTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGGAATACCCTCCTTG 329654 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||| || |||| || | |||||||| || ||||| || | ||| | Sbjct 329655 TCTTGAATCTTAGACTTGACATTGTCAATAGTGTCGGAGGATTCGACCTCCAAAGTGATG 329714 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAA 45332 || || || || | ||| || || ||| Sbjct 329715 GTCTTACCAGTCAAAGTCTTGACGAAA 329741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002606745800