Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq47 143 3e-29 seq36 91.5 2e-13 seq103 86.0 8e-12 >seq47 Length=438083 Score = 143 bits (158), Expect = 3e-29 Identities = 541/835 (65%), Gaps = 19/835 (2%) Strand=Plus/Plus Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 116484 ||||| || || || |||||||| || || | | ||||||||||| | ||| || | | Sbjct 245428 GGAAGCGCAATAGAAGCCAGATTGCAAACTGCAGATTCATCCTTATCGGAGTATTCAACA 245487 Query 116485 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 116544 ||||| ||| | ||| || ||||| |||| ||||||||| || |||| Sbjct 245488 ATTTCACAACAAAGATTGGATGATTTAATCACACCCAGGTTCTTTTGGTTACTCTTTTCA 245547 Query 116545 TTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 116604 || || ||||||||||| | |||| | || || || || || || || | | ||| || Sbjct 245548 TTGCAAGCATCCTTGTATAACATAAAAGGTGTACCAGTTTCTGTCTGAGCTTCGAGGATG 245607 Query 116605 GCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGG--CTCGCCCCTCCTCCTCGTAC 116661 || | ||| | | || | | | | | || | || | ||||| || | ||| || Sbjct 245608 GCGTACCACAACTTCTGAGCC---CTTATTGTCTTTCTACCACGCCCTTCTTGCTCATAT 245664 Query 116662 TTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCT 116721 || || || || |||||||||| || | | || || | ||||| || || || Sbjct 245665 CTTTCATATAGCGCTTCAAACTCTTTCCCGTAAACATCAGATAAACCTGGCGC-TTCGCT 245723 Query 116722 -GGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGAT 116780 || |||| || | ||||| || || || || |||||||| || | ||| | || Sbjct 245724 AGGGGAGAAAAGGGTCCATTCTCCGTTCTGTTCTACACGCTTCATAAATAAGTCGGAAAT 245783 Query 116781 CCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAA 116840 ||| | ||| | || | ||| | |||| || || | || ||||| | | Sbjct 245784 CCATAACGCTGGAAACAAATCTCTGGCGCGAATCTCCTCCTTACCGTGATTTTTCCTAAT 245843 Query 116841 CTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC--- 116897 || | ||| || | ||||| |||||||| || |||| || | || | | || Sbjct 245844 GTCGATAAAATCAAAAATATCAGCGTGCCAGGGCTCCAAATATAGGGCAAAAGCGCCAGG 245903 Query 116898 -CTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTG 116956 ||| | |||| | |||| ||||||| || || ||||| || |||| ||| | Sbjct 245904 TCTTTT-ATTACCACCTTGGTCCACATACCGAGCAGTATTATTAAAAACACGAATCATGG 245962 Query 116957 GAATGATACCATCAGATTGGCCATTTGTCCCCCGAATA--CGAGACTTGTTGGCTCTGAC 117014 | || | |||| |||| || || || || |||| ||| || |||| | || Sbjct 245963 GGATTAGTCCATTAGATGTACCGTTGGTACCAGCAATATACGA-ACCAGTTGAA-CGGAT 246020 Query 117015 ATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAG 117074 || |||||| |||| ||||||||| || || ||| ||||| || || || | || Sbjct 246021 ATTGTGGATATGCAAACCAATACCACCAGCAGTCTTGGAGATCATAGCACATTCTTTTAG 246080 Query 117075 ACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACAT 117134 | || | ||||| || ||||| |||||| | || | || | |||||||| | ||| Sbjct 246081 AGTGTCATAGATACCCTCGATAGAGTCATCTTTCATGGCTACCAGGAAGCAAGAAGCCAT 246140 Query 117135 TTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTT- 117193 || || ||| || || || ||||| || || || | ||||||||||| ||||||| Sbjct 246141 CTGAGGATGTGGGGTTCCTGCATTGAATAGCGTAGGGGAAGCGTGGATGAA-ATACCTTA 246199 Query 117194 GGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACC 117248 | ||||| | ||| ||||| | | | ||| || || |||||||| || Sbjct 246200 GAGACATTAGGTTGTAAGTCTCAATAGCTGCCTTAATATCATCACCGTGAATGCC 246254 >seq36 Length=192470 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 115564 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 115623 || ||||||||||| || | ||| || ||||| ||||| | |||||| | || || Sbjct 96624 TAATACATCCCCGTTTTCAACCCTTGTTTCCATGCATAGAAATGCATGCTAGTCAGTTTT 96565 Query 115624 GAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCC 115683 | || ||| || |||||| || |||| |||||| || |||||||| ||| || Sbjct 96564 CCCATAGTAGGAGCTTTCATGAAAAGATTCAAACTTTGCGACTGATCGATAAAGGGTGAT 96505 Query 115684 CGATCCGCCGCCATATCAATCA--CATCCTTCATCTTGATTTCCCACACAGTTCTGTAGA 115741 | ||| |||||||| || | |||| || | ||| |||||||||||| |||||| Sbjct 96504 CTATCGCGTGCCATATCTATGAGGCATCTTTGA--GGGATCTCCCACACAGTTTTGTAGA 96447 Query 115742 GGTTCTTAATATCATCTGGGATATCCACG-ATATTTTGGATAGAGCC 115787 | ||| || |||||| | |||| | | |||||| ||||| || Sbjct 96446 TATGCTTGATCCAATCTGGCA-ATCCTTGCACATTTTGTATAGATCC 96401 >seq103 Length=1149457 Score = 86.0 bits (94), Expect = 8e-12 Identities = 345/530 (65%), Gaps = 25/530 (5%) Strand=Plus/Minus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| ||| ||| | || || || | |||| | || || || ||| ||| || Sbjct 423174 AGCAAAGTCTGTGTGCAATCCTTCATCTCTACAGATTAACTCGTTTGAAAAGGTCAGGCC 423115 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||||||| ||| ||| || | ||| || || || ||| || || ||||| ||||| Sbjct 423114 TGGCATGAGGCCCTTCTTTTTGAGCCAAAAGATGGCGGCAAAAGATCCCGAGAAAAAGAT 423055 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGC-AAAGGAGCGGGACTTTGT-ATC- 127695 || || || || || || | || | ||| || || ||| | |||| ||| Sbjct 423054 ACCTTCTACTGCGGCAAATGCCACCAGCCTCTCAGCGTAAAGAG-----CATTGTCATCT 423000 Query 127696 --AAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCT 127753 || |||| | || ||||||| ||||||| || ||| |||| | || ||||| Sbjct 422999 TGAATCCACCTGATAGCCCACTCAGCCTTTTCCTTGATCTGAGGGATGTGCTCAATCGCA 422940 Query 127754 TCA---AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAA 127810 | | |||| ||| | || || | ||||| |||||||| | || || | | ||| Sbjct 422939 TTAAACAAGAAATCC--CGTTCCTTA-GGATCCTTGATGTATGTCTCGATTAATAATGAG 422883 Query 127811 TATGTTTCGCCGTGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTC 127869 || || || |||| ||| ||| || | ||| || |||||||| | || || Sbjct 422882 TAAGTCTCCGAATGGATATTTTCCATCAT-GATCTGGAACCCGTAGAAACATTTGGCCTC 422824 Query 127870 GCTTATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGA 127929 |||||| ||||| ||| |||||| | | | ||||||| |||||||| || || Sbjct 422823 TGGTATCTGAACCTCTGCGGAAAAATTCTCAACTAAATTCTCATTGACAATTCCGTCAGA 422764 Query 127930 CCCAGCAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGT--TCAGG 127984 | ||||| || || |||| || || | | |||| ||| | |||| || || Sbjct 422763 TGCCGCAAAGAAAGCTAGGACTCTAGACATAAAGAATCTCT-CGCCTTCT-GTCATCCTA 422706 Query 127985 GTCTTCCAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 | | ||| || | | ||| || || || || | |||||| |||||||| Sbjct 422705 TTTTCCCAATCATTTATATCTTTCGACAGGTCAATCTCCTCTGCAGTCCA 422656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506394771800