Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq70 98.7 1e-15 seq34 96.9 4e-15 >seq70 Length=181133 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||||| | ||| |||||||||||||| ||| ||||| || || ||||| ||| Sbjct 22261 CCACCTCTTAGTCTCAAAACCAGATGCAATGTTGACTCTTTTTGAATGTTATAGTCAGAT 22320 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| | | || || |||||||| || || || ||||| | || ||||| | || Sbjct 22321 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 22380 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | || || ||| ||||||| ||| | ||| | | | ||||| ||||| || Sbjct 22381 ATACCTTCTTTATCCTGGATCTTCGACTTTA-CGTTGTCGATAGTGTCAGAGGATTCAAC 22439 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || || || || || || || || |||||||| || ||||| Sbjct 22440 CTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 22487 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||||| | ||| ||||||||||| || ||| ||||| || || ||||| ||| Sbjct 22717 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 22776 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| | | || || |||||||| || || || ||||| | || ||||| | || Sbjct 22777 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 22836 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | || || || ||||||| ||| | ||| | | | ||||| || ||||| Sbjct 22837 ATACCTTCTTTATCTTGGATCTTCGACTTTA-CGTTGTCGATAGTGTCAGAAGACTCCAC 22895 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || || || ||||| |||| ||||||||||| || ||||| Sbjct 22896 CTCTAATGTAATAGTCTTGCCGGTCAATGTTTTAACAAAAATCTGCAT 22943 Score = 89.7 bits (98), Expect = 6e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||||| | ||| ||||||||||| || ||| ||||| || || ||||| ||| Sbjct 22489 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 22548 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| | | || || |||||||| || || || ||||| | || ||||| | || Sbjct 22549 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 22608 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | || || || ||||||| ||| | ||| | | | ||||| ||||| || Sbjct 22609 ATACCTTCTTTATCTTGGATCTTCGACTTTA-CGTTGTCGATAGTGTCAGAGGATTCAAC 22667 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || || || || || || || || |||||||| || ||||| Sbjct 22668 CTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 22715 Score = 89.7 bits (98), Expect = 6e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || |||||||| | ||| || || || | || ||||||||||||||||| || ||| Sbjct 22945 CCACCTCTTAATCTCAAAACGAGGTGTAGAGTTGATTCCTTTTGGATATTGTAATCAGAT 23004 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||| | | || || | |||||| || ||||| ||||| | ||||| || | || Sbjct 23005 AAAGTTCTGCCATCCTCCAACTGCTTACCTGCGAAGATCAATCTTTGCTGATCAGGTGGG 23064 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | || || || ||| ||||||| ||| | ||| | | | ||||| ||||| || Sbjct 23065 ATGCCTTCTTTATCCTGGATCTTCGACTTTA-CGTTGTCGATAGTGTCAGAGGATTCGAC 23123 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || || || || || || || || |||||||| || ||||| Sbjct 23124 CTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 23171 >seq34 Length=390617 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| || | ||| |||| ||||| || ||||||||||| |||||||| || Sbjct 329523 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 329582 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||| | | || || | |||||| || ||||| ||||| | ||||||||| | || Sbjct 329583 AAAGTTCTGCCATCCTCCAACTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGGA 329642 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||||||||| ||||| ||||| | | | |||||| ||||| || Sbjct 329643 ATACCCTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCGGAGGATTCGACC 329702 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAA 46584 |||| |||||||| || || |||| || || || || Sbjct 329703 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 329740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237658124600