Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq27 154 6e-32 seq70 125 3e-23 seq47 98.7 4e-15 >seq27 Length=444971 Score = 154 bits (170), Expect = 6e-32 Identities = 274/392 (70%), Gaps = 7/392 (2%) Strand=Plus/Plus Query 451217 TATAAAGGTGAAACTAAAACT-TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAA 451275 || |||||||| | || || ||| | || |||||||| || || ||| || | || Sbjct 193734 TACAAAGGTGAG-CAGAAGCTGTTTACCCCAGAAGAAATATCTTCGATGATTTTGGGCAA 193792 Query 451276 AATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGT 451335 ||||||||||| |||||| ||| | || | || | ||||| || | || || Sbjct 193793 GATGAAAGAAACGGCAGAAGGGTATCTAGGCGGTGAGGTCAAAGATGCCGTCGTAACGGT 193852 Query 451336 TCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGG-ACATATTGCTG 451394 |||||||| || || ||| | || | |||||||| || ||||| || ||| ||||| | Sbjct 193853 GCCCGCTTACTTTAACGATTCTCAGAGACAAGCAACAAAGGATGCGGGTACA-ATTGCGG 193911 Query 451395 GTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAG 451454 | |||| ||| | || || ||||| ||||| ||||||||||| | || || || || Sbjct 193912 GGCTAAACGTTTTGCGTATCATTAACGAACCCACAGCAGCTGCAATCGCTTACGGTCT-T 193970 Query 451455 GAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTC 451514 || || ||||| | | || |||| ||||| | || || || ||||| || ||| Sbjct 193971 GACAAGAAAAAG--TCTGGTGAGCAAAACGTTTTAATCTTCGACTTGGGTGGTGGTACTT 194028 Query 451515 ATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTG 451574 |||| || | | || || || || || |||||||||| ||||| || |||| Sbjct 194029 TTGATGTGTCGCTGTTGTCTATCGATGAAGGTATATTTGAAGTCAAGGCCACTGCCGGTG 194088 Query 451575 ATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 |||||||||| || ||||||||| |||| ||| Sbjct 194089 ATACTCATCTGGGTGGTGAAGATTTTGACAAT 194120 Score = 84.2 bits (92), Expect = 9e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 452315 CCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTT 452374 |||||||||||| |||| | ||||||||||| ||||||||||| ||||| ||| || Sbjct 194829 CCTCAAATTGAAGTTACTTTCGATGTTGATGCTAATGGTATTCTAAATGTCTCTGCCGTA 194888 Query 452375 GAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTATCT 452434 ||||| | | || || | | | ||||| || ||||| || || | | | || Sbjct 194889 GAAAAGGGAACCGGTAAGACCAATCATATTACGATCACTAACGACAAGGGCAGACTGTCC 194948 Query 452435 AAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGA 452490 ||||||||||| || || ||||| || || || |||| || | || ||||| Sbjct 194949 AAAGAAGATATCGAGAAGATGGTGTCAGAGGCCGAGAAATATAAAGCCGACGATGA 195004 >seq70 Length=181133 Score = 125 bits (138), Expect = 3e-23 Identities = 162/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| ||||| || || || ||||| |||||||| || || |||||||| ||| Sbjct 22259 ATGCAGATTTTTGTTAAGACTCTTACCGGTAAGACTATTACACTCGAAGTTGAATCCTCT 22200 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | | ||| || ||||| || ||||| || ||||| || || ||| Sbjct 22199 GATACCATTGACAATGTCAAATCCAAGATTCAGGACAAGGAGGGCATTCCGCCCGACCAA 22140 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || || |||| || ||||| || |||||||||||| | | || || || Sbjct 22139 CAGAGATTGATCTTTGCAGGTAAGCAACTGGAGGATGGAAGAACTCTTTCTGACTACAAC 22080 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || || || | || ||||| | ||||| Sbjct 22079 ATTCAAAAAGAGTCGACCCTACATCTTGTGCTAAGATTAAGAGG 22036 Score = 125 bits (138), Expect = 3e-23 Identities = 162/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| ||||| || || |||||||| |||||||| ||||| |||||||| ||| Sbjct 22487 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 22428 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | || || || || ||||| ||||| || || ||||| ||| Sbjct 22427 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 22368 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || || || |||| || || || || |||||||||||| | | || ||||| Sbjct 22367 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22308 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || ||||| | || | || || ||||| ||||| Sbjct 22307 ATTCAAAAAGAGTCAACATTGCATCTGGTTTTGAGACTAAGAGG 22264 Score = 120 bits (132), Expect = 1e-21 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || ||||| || || |||||||| |||||||| ||||| |||||||| ||| Sbjct 22715 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 22656 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | || || || |||||||| ||||| || || ||||| ||| Sbjct 22655 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 22596 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || || || |||| || || || || |||||||||||| | | || ||||| Sbjct 22595 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22536 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || |||| | || | || || ||||| ||||| Sbjct 22535 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGG 22492 Score = 107 bits (118), Expect = 8e-18 Identities = 158/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| ||||||||| |||| || || |||||||| | || || || || ||| Sbjct 22943 ATGCAGATTTTTGTTAAAACATTGACCGGCAAGACTATTACATTAGAGGTGGAGTCTTCT 22884 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | || || || |||||||| ||||| || || ||||| ||| Sbjct 22883 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 22824 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || || || |||| || || || || |||||||||||| | | || ||||| Sbjct 22823 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22764 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || |||| | || | || || ||||| ||||| Sbjct 22763 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGG 22720 >seq47 Length=438083 Score = 98.7 bits (108), Expect = 4e-15 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 163330 GTTGGAAATTTTAAAATAGAACCTCCTGGTATATTTTTAGGTAGAGGTTCCCATCCAAAA 163389 ||||| ||||||||||||||||| |||||| | || |||| | ||| | || || ||| Sbjct 330116 GTTGGTAATTTTAAAATAGAACCACCTGGTTTGTTCAGAGGTCGCGGTGCACACCCTAAA 330175 Query 163390 ATAGGAAAATGGAAAAGAAGAATATATCCAGAAGATGTTATTTTAAATTTAGATAAAAAT 163449 | || |||| |||| | ||| | |||||||||||||| | |||||| |||| || | Sbjct 330176 ACTGGTAAATTGAAACGTAGAGTTTATCCAGAAGATGTCGTGTTAAATCTAGACAAGGAC 330235 Query 163450 GCACCTATTCCA 163461 || || |||||| Sbjct 330236 GCCCCAATTCCA 330247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975715742041340