Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq70 170 4e-37 seq34 132 1e-25 seq40 131 4e-25 seq47 89.7 1e-12 >seq70 Length=181133 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||||||||| || || | ||| |||||||||||||| || || || | ||||| Sbjct 22722 TCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGT 22781 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||| || |||||||||||||| ||||| | || ||||||||| || || || || Sbjct 22782 TCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACC 22841 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| ||||| || || ||| ||||| || || ||||| ||| ||||| || | Sbjct 22842 TTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACCTCTAA 22901 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| ||||| || ||||| ||||| || || | ||||| Sbjct 22902 TGTAATAGTCTTGCCGGTCAATGTTTTAACAAAAATCTGCAT 22943 Score = 167 bits (184), Expect = 5e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||||||||| || || | ||| |||||||||||||| || || || | ||||| Sbjct 22494 TCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGT 22553 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||| || |||||||||||||| ||||| | || ||||||||| || || || || Sbjct 22554 TCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACC 22613 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| ||||| || || ||| ||||| || || ||||| || ||| || ||||| Sbjct 22614 TTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAG 22673 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| ||||| || || | ||| || || || | ||||| Sbjct 22674 TGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 22715 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | ||||| || || || |||||||||||||| ||||| || | |||||| Sbjct 22038 TCTTAATCTTAGCACAAGATGTAGGGTCGACTCTTTTTGAATGTTGTAGTCAGAAAGAGT 22097 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||| || || ||||||||||| ||||| | || |||||||| || |||||||| Sbjct 22098 TCTTCCATCCTCCAGTTGCTTACCTGCAAAGATCAATCTCTGTTGGTCGGGCGGAATGCC 22157 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||| ||||| || ||||| || |||||||| || || ||| ||||| || Sbjct 22158 CTCCTTGTCCTGAATCTTGGATTTGACATTGTCAATGGTATCAGAGGATTCAACTTCGAG 22217 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| ||||| || || | ||| || || || | ||||| Sbjct 22218 TGTAATAGTCTTACCGGTAAGAGTCTTAACAAAAATCTGCAT 22259 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||||||||| || || | || |||||||||||||| || || || | ||||| Sbjct 22266 TCTTAGTCTCAAAACCAGATGCAATGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGT 22325 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||| || |||||||||||||| ||||| | || ||||||||| || || || || Sbjct 22326 TCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACC 22385 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| || || || || ||| ||||| || || ||||| || ||| || ||||| Sbjct 22386 TTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAG 22445 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| ||||| || || | ||| || || || | ||||| Sbjct 22446 TGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 22487 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| ||||| ||||| || || ||||| ||||||||||| | | ||| Sbjct 22950 TCTTAATCTCAAAACGAGGTGTAGAGTTGATTCCTTTTGGATATTGTAATCAGATAAAGT 23009 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||| || | |||||||||||||||||| | || ||| || || || || ||||| Sbjct 23010 TCTGCCATCCTCCAACTGCTTACCTGCGAAGATCAATCTTTGCTGATCAGGTGGGATGCC 23069 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| || || || || ||| ||||| || || ||||| || ||| || ||||| Sbjct 23070 TTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCGACCTCAAG 23129 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| ||||| || || | ||| || || || | ||||| Sbjct 23130 TGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 23171 >seq34 Length=390617 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | ||| | ||||| || ||||| || ||||| || | | ||| Sbjct 329528 TCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGT 329587 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||| || | ||||||||| ||||| || | || || ||||| || ||||| || Sbjct 329588 TCTGCCATCCTCCAACTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGGAATACC 329647 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||||||||| || |||||| || ||||| ||||| || ||| || || | Sbjct 329648 CTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCGGAGGATTCGACCTCCAA 329707 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || | ||||| || |||||||| || ||||| Sbjct 329708 AGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 329740 >seq40 Length=692676 Score = 131 bits (144), Expect = 4e-25 Identities = 155/206 (75%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002 || || || || ||||| || || || | |||| ||||| ||||| || | |||||||| Sbjct 222391 GTAGATTCCTTCTGAATGTTATAGTCAGACAAG-GTTCTGCCATCCTCCAATTGCTTACC 222333 Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062 || ||||| | || || || || || ||||| ||||| ||||||||||| ||| ||| Sbjct 222332 AGCAAAGATCAATCTCTGCTGATCAGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTT 222273 Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122 ||| || || || ||||| ||| || ||||||||||||| ||||| || ||||| || Sbjct 222272 GACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGGGTAATAGTCTTACCCGTCAAGGT 222213 Query 195123 TTTTACGAACACTTGCATTTATGGTT 195148 || ||||| | ||||| | ||||| Sbjct 222212 CTTGACGAAAATCTGCATCT-TGGTT 222188 >seq47 Length=438083 Score = 89.7 bits (98), Expect = 1e-12 Identities = 234/353 (66%), Gaps = 8/353 (2%) Strand=Plus/Minus Query 160513 CTGGCACGTTGACATCTTTGACTTTGTCGA---TGCGAAAAAGCCCGGAGGTGATGACCT 160569 |||||||| ||| || ||||| ||| |||| | |||||| | ||| || || Sbjct 245874 CTGGCACGCTGATATTTTTGATTTTATCGACATTAGGAAAAATCACGGTAAGGAGGA--- 245818 Query 160570 GATGAGAGCCAGAGAGAT-TTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAG 160628 ||| | |||||||| | |||| | || | |||| |||||| | || |||||| | | Sbjct 245817 GATTCGCGCCAGAGATTTGTTTCCA-GCGTTATGGATTTCCGACTTATTTATGAAGCGTG 245759 Query 160629 TGAAAGACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATG 160688 | || | || || || |||| |||||||| || | |||||||| || | ||||| Sbjct 245758 TAGAACAGAACGGAGAATGGACCCTTTTCTCCCCTAGCGAAGCGCCAGGTTTATCTGATG 245699 Query 160689 TTTATGGTTCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAA 160748 |||| || ||||| || | || ||||||||||| || |||| || | | | || Sbjct 245698 TTTACGGGAAAGAGTTTGAAGCGCTATATGAAAGATATGAGCAAGAAGGGCGTGGTAGAA 245639 Query 160749 AGGTCGTGAAGGCCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTA 160808 || | | ||| || | ||||| | |||||| | || || || |||| Sbjct 245638 AGACAATAAGGGCTCAGAAGTTGTGGTACGCCATCCTCGAAGCTCAGACAGAAACTGGTA 245579 Query 160809 TGCCCTTTATCGCATACAAGGATGCCATCTGTCGCAAGAGTAACCAGAAGAAC 160861 || ||||| |||||||||||| | | ||||||||||| |||||| Sbjct 245578 CACCTTTTATGTTATACAAGGATGCTTGCAATGAAAAGAGTAACCAAAAGAAC 245526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109480107400535