Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq70 107 1e-18 seq40 84.2 1e-11 >seq70 Length=181133 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 ||||| |||||||| ||||| ||||| ||| | |||| ||||| || || || ||||| Sbjct 22069 TCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCCATCCTCCAGTTGCTTACCTGCAAAG 22128 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || || ||||| |||| | ||||||||||| |||||| |||||| Sbjct 22129 ATCAATCTCTGTTGGTCGGGCGGAATGCCCTCCTTGTCCTGAATCTTGGATTTGACATTG 22188 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| || ||||| |||| || || || || || || |||||||| ||| Sbjct 22189 TCAATGGTATCAGAGGATTCAACTTCGAGTGTAATAGTCTTACCGGTAAGAGTCTTAACA 22248 Query 34971 AAGATCTGCATA 34982 || ||||||||| Sbjct 22249 AAAATCTGCATA 22260 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 |||||||||| || | ||| ||||| |||||||||||||| || || ||| | || Sbjct 22273 CTCAAAACCAGATGCAATGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTTCCA 22332 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || |||||||| || || ||||| || | || ||| ||||| | || | || || || Sbjct 22333 TCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTA 22392 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || |||||| || ||| | || | ||| || ||||| || | || || Sbjct 22393 TCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGTAATA 22452 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || |||||||| ||||| ||||||||| Sbjct 22453 GTCTTACCAGTAAGAGTCTTAACAAAAATCTGCATA 22488 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 |||||||||| || | || ||||| |||||||||||||| || || ||| | || Sbjct 22501 CTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTTCCA 22560 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || |||||||| || || ||||| || | || ||| ||||| | || | || || || Sbjct 22561 TCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTA 22620 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || |||||| || ||| | || | ||| || ||||| || | || || Sbjct 22621 TCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGTAATA 22680 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || |||||||| ||||| ||||||||| Sbjct 22681 GTCTTACCAGTAAGAGTCTTAACAAATATCTGCATA 22716 >seq40 Length=692676 Score = 84.2 bits (92), Expect = 1e-11 Identities = 162/237 (68%), Gaps = 8/237 (3%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| || | |||||||| | || ||| ||||||||||||||||| || Sbjct 222421 CCACCTCTCAATCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGAC 222362 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | ||| |||| |||| || || || ||||| || | || ||||| || | || Sbjct 222361 AAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGA 222302 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930 | || |||||||| |||||| ||||| || | ||||| ||| | ||| Sbjct 222301 ATACCTTCCTTGTCTTGAATCTTTGACTTGAC--AT--TGTCGATAGTGTCAGAAGACTC 222246 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTCGT 34987 || || | ||| || || || ||||| | ||||| || || |||||||| || || Sbjct 222245 GACTTCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCATCTTGGT 222189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633184570440