Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq103 212 7e-50 seq36 163 3e-35 >seq103 Length=1149457 Score = 212 bits (234), Expect = 7e-50 Identities = 599/912 (66%), Gaps = 11/912 (1%) Strand=Plus/Minus Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 ||||| || || | ||| || ||||||||||| ||||||||||| | | || ||| | Sbjct 423467 TTTTGGTAATCCGAAACCCTCTTTTCAAAGAAGTTAGTTTTTCCTGCCAGCGAAATATTT 423408 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 |||||||| ||||| ||||| | ||||| | ||| ||| || | | | || Sbjct 423407 TCCATAAAGTCAAACGGATTAGTAACATTGAAGTATTTCTTGTTCCCAAGAGCGACCAGC 423348 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 || || || |||||||| | || || ||||||| | |||||| || | | Sbjct 423347 AGCCTGTCTGCTACAAACTCAACGTACTGATTCATCAGCGCGGCATTCATGCCCAGCAGA 423288 Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTT--ACTGCCTCTGATATAA 18907 || || || || || | ||||| | | |||| || | || || |||| || | Sbjct 423287 GCCACGGGGAGCGCGTCGAT--GAAATACCTTTTCTCGATCTCGACAGCTTCTGTAATGA 423230 Query 18908 TAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAA 18967 | | ||| |||| || ||| || | ||||| |||||| | ||| |||| Sbjct 423229 TCCTTTCAATAATATCAGGATCAGGCTTGTTTCTTAGATGGGAAAACATTAGACAAGCAA 423170 Query 18968 AATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCA 19027 | || || | ||| || ||||||| || || || || ||||| || | || |||| Sbjct 423169 AGTCTGTGTGCAATCCTTCATCTCTACAGATTAACTCGTTTGAAAAGGTCAGGCCTGGCA 423110 Query 19028 TCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTT 19087 | || || | ||||| | ||| || || | ||||| ||||| || || || ||||||| Sbjct 423109 TGAGGCCCTTCTTTTTGAGCCAAAAGATGGCGGCAAAAGATCCCGAGAAAAAGATACCTT 423050 Query 19088 CTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATT 19147 ||||||| ||||| || || || || || | ||| ||||| | || |||||||| Sbjct 423049 CTACTGCGGCAAATGCCACCAGCCTCTCAGCGTAAAGAGCATTGTCATCTTGAATCCACC 422990 Query 19148 TCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGAT 19207 | | ||||| |||||||| | || | || || ||| || | |||||| | | Sbjct 422989 TGATAGCCCACTCAGCCTTTTCCTTGATCTGAGGGATGTGCTCAATCGCATTAAACA-AG 422931 Query 19208 ACAT-ACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAA 19266 | || || || | | ||| || | |||| || || ||||| ||| | || ||| Sbjct 422930 AAATCCCGTTCCTTAGGATCCTTGATGTATGTCTCGATTAATAATGAGTAAGTCTCCGAA 422871 Query 19267 TGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACT 19326 || |||||||| || ||||| || ||||| |||||| | || |||| |||||| || Sbjct 422870 TGGATATTTTCCATCATGATCTGGAACCCGTAGAAACATTTGGCCTCTGGTATCTGAACC 422811 Query 19327 TCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAAT 19386 || |||| | || || ||||| ||||| || ||||| ||| || ||||| || Sbjct 422810 TCTGCGGAAAAATTCTCAACTAAATTCTCATTGACAATTCCGTCAGATGCCGCAAAGAAA 422751 Query 19387 GCTAATACATGTTTA-ATAAAATGTTTTTCATCTGAGGTTAATGTATT---CCAATCATT 19442 |||| || | | | ||||| | | || || || | |||| ||||||||| Sbjct 422750 GCTAGGAC-TCTAGACATAAAGAATCTCTCGCCTTCTGTCATCCTATTTTCCCAATCATT 422692 Query 19443 AATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATA 19502 |||||||| || | || | || || | ||||| ||||| ||||| || |||| || Sbjct 422691 TATATCTTTCGACAGGTCAATCTCCTCTGCAGTCCAGAAAGATGCCTCCGCCCTTTTGTA 422632 Query 19503 CATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTCTTT 19562 | ||| || ||| |||| ||||| || | || || ||| ||| || || | Sbjct 422631 GGCCTGCCAAATCTCATGATACCTGATAGGGAAGAGCACGAACCTACGTTTGTTCTCAAT 422572 Query 19563 AAGAATAGGTTC 19574 ||| | ||||| Sbjct 422571 AAGCAATGGTTC 422560 >seq36 Length=192470 Score = 163 bits (180), Expect = 3e-35 Identities = 537/824 (65%), Gaps = 23/824 (3%) Strand=Plus/Minus Query 47877 AGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATT 47936 || || | |||||||| ||| || |||||| ||||||| | | | || | || |||| Sbjct 95736 AGAGCAACAGATGCTAAATTGCAAACAGCTGTCTCATTTTCAGAACTGTACTCTACTATT 95677 Query 47937 TCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATT--ATTNNNNTTGT 47994 ||| ||| || || ||||||| || || ||||||| || || ||| || Sbjct 95676 TCACAACAGAGGTTGGAGGATTTGATCGTGCCTAAATTTTTTTGGTTCGATTTAGA--GT 95619 Query 47995 TACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATT-CAATGATA 48053 | || | |||||||| ||||| ||||| ||| || |||| |||| || || | Sbjct 95618 TGCAAACATCCTTGTAGAGCATGAAAGGCCCTCCTGTCTCTACCTGACTTTGCAGT---- 95563 Query 48054 GATTTCCAAACAG---TCCTAGCCTTTATAACAGCTCTAGCTTTA-TTATCATGT----T 48105 ||||| | || | || | |||| | ||| || || || | || | Sbjct 95562 -ATTTCTGACCATAGTTTCTGGGCTTTGATTC-GCTTTACAGGTAATTCTGGAGTGGTTT 95505 Query 48106 CGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATT 48165 | ||||| ||| || | |||||||| |||||||| |||| | |||||| || || Sbjct 95504 CATATTTTTCATACAATTCTTCAAATTCCTCCCCATAAACATCGTTTAACCCTGGCGCTT 95445 Query 48166 CATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTG 48225 ||| |||| | || |||| || | | || || || |||| |||| |||| Sbjct 95444 CATCTGGACTGAATAAACACCATTCTCCGTTGGATTGCACCCTCTTCATGAATAAGTCTG 95385 Query 48226 GTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTT 48285 | ||||| | ||||| ||||||||| |||| || || || || || || || || Sbjct 95384 GAATCCATAAAGCTAGAAATAAATCTCTAGCCCTGAGCTCCTCTTTTCCGTGGTTTTTTC 95325 Query 48286 TAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTA-CA 48344 | |||| | |||||| | | ||| | |||||| || || || || || || || | Sbjct 95324 TGAGTTGCAAAAAGTCGAAGACATCTGAATGCCAGGGCTCCAAGTAAAT-GCAATAGGCT 95266 Query 48345 CCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAAC 48404 || |||| |||||||||||||||||| | ||||||||| || ||||| |||| | | | Sbjct 95265 CCCGGTCTTTTATTACCTCCTTGATCGACATATCTGGCCGTGTTGTTGAAAACACGAAGC 95206 Query 48405 ATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTT 48464 || || || | ||||| || | || || | ||||| | || || || ||||| Sbjct 95205 ATAGGAACTAATCCATTGGAAACTCCGTTAGACCCCGATACGTAGGCACCGCTGCCTCTT 95146 Query 48465 ATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTA 48524 || || || |||||||| || || | || || |||| ||| | | Sbjct 95145 ATGTTGGAAACATGGATACCTATTCCCCCGGAGGCCTTTGAAATTAAAGCTGTCTCATGT 95086 Query 48525 AGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGAC 48584 || || | | |||| || || || ||| ||| |||| ||| ||||| || ||| Sbjct 95085 AGCGTCTTAAAAATGCCATCAATGGAATCTTCTTTCATGCTTACGAGAAAGCATGATGAC 95026 Query 48585 ATTTGCGGA-TGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTT 48643 | | | || |||| ||| || | |||||| || || || |||||||| ||||| |||| Sbjct 95025 AGATACTGATTGAC-AGTACCGGCATTAAACAAGGTAGGCGATGCATGTATAAAAAATTT 94967 Query 48644 CTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCC 48687 | || | | || || || | || || | ||||||||||| Sbjct 94966 TTGAGACATGAGTTCGTAGGTATTAAGTACGGCATCTATATCCC 94923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108062232200