Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq70 113 3e-20 seq40 95.1 9e-15 seq34 86.0 5e-12 >seq70 Length=181133 Score = 113 bits (124), Expect = 3e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 ||| | |||||| || |||||||||||| ||||| ||||| ||| ||| | || || Sbjct 22050 CACAAGATGTAGGGTCGACTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCCATCCTC 22109 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 || |||||||| ||||| |||| || |||||| || | |||| |||||||||||| Sbjct 22110 CAGTTGCTTACCTGCAAAGATCAATCTCTGTTGGTCGGGCGGAATGCCCTCCTTGTCCTG 22169 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 |||||| ||| ||| | | | || || | || || || | ||||| || || Sbjct 22170 AATCTTGGATTTGACATTGTCAATGGTATCAGAGGATTCAACTTCGAGTGTAATAGTCTT 22229 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | ||| || |||||||||||||| Sbjct 22230 ACCGGTAAGAGTCTTAACAAAAATCTGCAT 22259 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || ||||| | ||| |||| ||| | || |||||||||||| || || |||||| Sbjct 22717 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 22776 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| ||| | || |||| ||||||||| ||||| |||| || ||||| || | || Sbjct 22777 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 22836 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || || || || ||||| ||||| | | || || || | ||||||| Sbjct 22837 ATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACC 22896 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||| || || || ||||| ||||| |||||||||||||| Sbjct 22897 TCTAATGTAATAGTCTTGCCGGTCAATGTTTTAACAAAAATCTGCAT 22943 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || ||||| | ||| |||| ||| | || |||||||||||| || || |||||| Sbjct 22261 CCACCTCTTAGTCTCAAAACCAGATGCAATGTTGACTCTTTTTGAATGTTATAGTCAGAT 22320 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| ||| | || |||| ||||||||| ||||| |||| || ||||| || | || Sbjct 22321 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 22380 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || || || || ||||| ||||| | | || || || | || ||| Sbjct 22381 ATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACC 22440 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||| || || || || | ||| || |||||||||||||| Sbjct 22441 TCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 22487 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || ||||| | ||| |||| ||| | || |||||||||||| || || |||||| Sbjct 22489 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 22548 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| ||| | || |||| ||||||||| ||||| |||| || ||||| || | || Sbjct 22549 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 22608 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || || || || ||||| ||||| | | || || || | || ||| Sbjct 22609 ATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACC 22668 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||| || || || || | ||| || ||||| |||||||| Sbjct 22669 TCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 22715 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || |||| | ||| || | ||||| || || ||||| ||||||||||||||| Sbjct 22945 CCACCTCTTAATCTCAAAACGAGGTGTAGAGTTGATTCCTTTTGGATATTGTAATCAGAT 23004 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | ||| | || |||||||||||||| || || |||| || || ||||| | || Sbjct 23005 AAAGTTCTGCCATCCTCCAACTGCTTACCTGCGAAGATCAATCTTTGCTGATCAGGTGGG 23064 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||| || || || ||||| ||||| | | || || || | || ||| Sbjct 23065 ATGCCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCGACC 23124 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||| || || || || | ||| || |||||||||||||| Sbjct 23125 TCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 23171 >seq40 Length=692676 Score = 95.1 bits (104), Expect = 9e-15 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || ||||| || || ||||| | ||| | || ||||| |||||||| ||||| Sbjct 222385 TCCTTCTGAATGTTATAGTCAGACAAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAG 222326 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| || ||| ||||| | |||| || |||||||| ||||||| || ||| Sbjct 222325 ATCAATCTCTGCTGATCAGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTTGACATTG 222266 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || || | ||| || || | ||||| || || |||||||| || || || Sbjct 222265 TCGATAGTGTCAGAAGACTCGACTTCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACG 222206 Query 48756 AAAATCTGCATCGTG 48770 |||||||||||| || Sbjct 222205 AAAATCTGCATCTTG 222191 >seq34 Length=390617 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| ||||| || | ||| || ||||| || ||||| ||||| | | ||| | || Sbjct 329537 CAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATC 329596 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||||||||||||| || || |||| || ||| || || | |||| ||||||||||| Sbjct 329597 CTCCAACTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGGAATACCCTCCTTGTC 329656 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 |||||| || ||| | | || || || | || ||||||| || || || Sbjct 329657 TTGAATCTTAGACTTGACATTGTCAATAGTGTCGGAGGATTCGACCTCCAAAGTGATGGT 329716 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAA 48758 || || |||||||| || || ||| Sbjct 329717 CTTACCAGTCAAAGTCTTGACGAAA 329741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937112518915