Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq40 104 2e-17 seq70 86.0 5e-12 >seq40 Length=692676 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || ||||| || || || || || || |||||||| || |||||| ||| || || Sbjct 222192 AAGATGCAGATTTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTTGAAGTCGAGTCT 222251 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | | || ||||| ||| || ||||| || || | || ||| Sbjct 222252 TCTGACACTATCGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCTGAT 222311 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 || |||||| | |||||||| || || |||||||| ||| | ||| || | || ||| Sbjct 222312 CAGCAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTAT 222371 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 |||||||| || |||||||| ||||| |||| | ||||| |||| || Sbjct 222372 AACATTCAGAAGGAATCTACCTTGCACTTGGTGCTTAGATTGAGAGGTGG 222421 >seq70 Length=181133 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || || | || ||||| || ||||| |||| ||| | || Sbjct 22259 ATGCAGATTTTTGTTAAGACTCTTACCGGTAAGACTATTACACTCGAAGTTGAATCCTCT 22200 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || |||| || || ||||| ||||| | || || ||| Sbjct 22199 GATACCATTGACAATGTCAAATCCAAGATTCAGGACAAGGAGGGCATTCCGCCCGACCAA 22140 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||| | |||||||| || || ||| |||| ||| | |||| | | || || ||| Sbjct 22139 CAGAGATTGATCTTTGCAGGTAAGCAACTGGAGGATGGAAGAACTCTTTCTGACTACAAC 22080 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||||||||| || || || || | || |||||||| |||| || Sbjct 22079 ATTCAAAAAGAGTCGACCCTACATCTTGTGCTAAGATTAAGAGGTGG 22033 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| |||||||| || || || || ||||| || ||| |||| Sbjct 22943 ATGCAGATTTTTGTTAAAACATTGACCGGCAAGACTATTACATTAGAGGTGGAGTCTTCT 22884 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | | ||| || ||| || ||||| || | || || ||| Sbjct 22883 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 22824 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || ||| | |||||||| || || || |||| ||| | |||| | | || |||||| Sbjct 22823 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22764 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||||||| || ||| |||| |||| || ||| || |||| || || Sbjct 22763 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGGTAT 22714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425404255614795