Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq27 210 1e-48 seq33 158 8e-33 seq70 131 1e-24 seq40 118 7e-21 >seq27 Length=444971 Score = 210 bits (232), Expect = 1e-48 Identities = 389/564 (69%), Gaps = 9/564 (2%) Strand=Plus/Plus Query 474316 AATGTCCAGAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTG 474375 |||||| ||| ||| | || || || ||||| || || ||| ||||| ||| || Sbjct 193421 AATGTCAAGA---GCAGTCGGAATAGACTTAGGTACCACATACTCGTGTGTCGCTCATTT 193477 Query 474376 GCAAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATA 474435 || || | ||| || || ||||| |||||||||||||| ||||| || ||||| || Sbjct 193478 TCAGAACGACCGAGTGGAGATTATTGCTAATGACCAAGGTAACAGAACTACCCCATCGTA 193537 Query 474436 TGTTTCTTTTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTG-CAT 474494 |||| | || || || || ||| | ||||| ||||| || || | || || | ||| Sbjct 193538 TGTTGCCTTCACAGATACAGAAAGATTAATTGGTGATGCCGCCAAGAACCAGGCAGCCAT 193597 Query 474495 CTAATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATA 474554 | ||||||| ||||| | ||||| ||||| | |||||||| | || |||||||| Sbjct 193598 C-AATCCTGAAAATACCGTGTTTGACGCTAAGCGTCTGATTGGTAGAAAGTTTGATGACC 193656 Query 474555 CCACTGTCCAATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAAC 474614 | || | |||| || | ||||| || || || | | ||| || | Sbjct 193657 CAGAGGTTATAAATGATGCTAAGCACTTCCCTTTCAAAGTAATTGACAAGGATGGCAAGC 193716 Query 474615 CATATA-TAG-AAGCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTC 474672 || | | ||| | |||||| |||||| || | ||| | || ||| |||| || Sbjct 193717 CACAGATTAGCGTGGAATACA--AAGGTGAGCAGAAGCTGTTTACCCCAGAAGAAATATC 193774 Query 474673 TTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAAC 474732 ||| ||| |||| | ||| |||||| |||| || ||||| || || || | Sbjct 193775 TTCGATGATTTTGGGCAAGATGAAAGAAACGGCAGAAGGGTATCTAGGCGGTGAGGTCAA 193834 Query 474733 TGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGA 474792 ||||| || | || || || || || ||||| |||||||| | |||||||| || || Sbjct 193835 AGATGCCGTCGTAACGGTGCCCGCTTACTTTAACGATTCTCAGAGACAAGCAACAAAGGA 193894 Query 474793 TGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGC 474852 |||||| | |||||| || || || ||||| ||||| ||||| ||||| |||||||| || Sbjct 193895 TGCGGGTACAATTGCGGGGCTAAACGTTTTGCGTATCATTAACGAACCCACAGCAGCTGC 193954 Query 474853 ACTTGCTTATGGTCTTGATAAGAA 474876 | | ||||| |||||||| ||||| Sbjct 193955 AATCGCTTACGGTCTTGACAAGAA 193978 Score = 188 bits (208), Expect = 5e-42 Identities = 552/828 (67%), Gaps = 38/828 (5%) Strand=Plus/Plus Query 475364 GCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCAT 475421 || || || || ||| | ||||| ||||||||||||||||| |||||| | || | ||| Sbjct 194076 GCCACTGCCGGTGATACTCATCTGGGTGGTGAAGATTTTGACAATAGATTGGTTAACCAT 194135 Query 475422 GGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTT----CAACATCTGCTAAA 475477 || | | || |||||||| || |||| ||||| |||| | | | | Sbjct 194136 C-TG-GCAGCTGAGTTCAAGAGAAAGTATAAGAAGGATCTAATGGGCAAC--CAG--AGA 194189 Query 475478 GCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACT 475537 | |||||| | || |||||||| || | || || |||| |||||||| || || Sbjct 194190 TCCTTAAGAAGACTGAGAACTGCCGCCGAGAGAGCCAAAAGAGCGCTTTCTTCGGCCACG 194249 Query 475538 CAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATT-AC 475596 || ||| | || ||| |||||||| | | ||||| ||||| | | || || | | || Sbjct 194250 CAGACTTCAGTAGAAATTGATTCTTTGTACGAAGGTATTGACTTCTACAC-CTCAGTGAC 194308 Query 475597 AAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGA 475656 || || | ||||||||| | ||| | || | || ||| ||| | || || ||||| Sbjct 194309 CAGAGCAAGATTTGAAGAGCTATGTGCAGACATGTTCAGATCCACATTGGAGCCTGTTGA 194368 Query 475657 ACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGG 475716 | || | ||||| | || | ||||| || || || || ||||| || ||||| || Sbjct 194369 GAAGGTGTTGAGAGACGCGAAGGTCGACAAGTCTCAGGTGCAGGAAATCGTACTTGTCGG 194428 Query 475717 AGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTT---TAATGGTAA 475773 ||| || || ||||| |||| || ||||| ||| ||| ||| | ||| || Sbjct 194429 AGGATCTACTAGAATCCCAAGGATCC-AGAAA--CTTGTATCTGGTTTCTTTTCTGGCAA 194485 Query 475774 AAAGTTAAATGAAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAA 475831 | || || |||| || || |||||||||||||||||||| || ||||| || ||| Sbjct 194486 AGAGCCCAAC--AAGTCTATCAACCCTGATGAAGCTGTTGCATACGGTGCTGCCGTGCAA 194543 Query 475832 GCAGCTATTTTATCAGGTCAATCAGAC--GAGAAACTAAATAATATTGTACTTGTTGACG 475889 || || ||||| | || | ||||| | | |||| | | | | | || | || | Sbjct 194544 GCTGCCATTTTGACCGG-CGATCAGTCCTCAAAAACGCAGGACT-TGTTGCTATTGGATG 194601 Query 475890 TAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACA 475949 | ||||| | || | ||| ||||||| | || || || ||||| || | ||| | Sbjct 194602 TGGCTCCATTGTCGCTTGGTATTGAAACTGCCGGTGGTATCATGACCAAATTGATTCCTA 194661 Query 475950 GAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAA 476009 |||| || ||||||| || || || | |||||||| || | || ||||| Sbjct 194662 GAAACTCTACTATCCCTACGAAGAAGTCCGAGACCTTTTCCACCTACGCAGACAATCAGC 194721 Query 476010 CAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAAC 476069 | || ||||| | | |||||||| || | || || | | ||||| | Sbjct 194722 CGGGCGTGTTGATCCAGGTGTACGAAGGTGAGAGGACTAAGACGAAGG---ACAACAATC 194778 Query 476070 --TTGG--AACTTTTAATCTTGA-AGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAAT 476124 |||| || || | |||| ||||| || || ||||| | || || |||||||| Sbjct 194779 TGTTGGGTAAGTTCGA--GTTGAGCGGTATCCCACCAGCTCCTCGTGGTGTCCCTCAAAT 194836 Query 476125 TGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGC 476172 |||||||||||| ||| ||||||| ||||||||||| ||||| |||| Sbjct 194837 TGAAGTTACTTTCGATGTTGATGCTAATGGTATTCTAAATGTCTCTGC 194884 >seq33 Length=533711 Score = 158 bits (174), Expect = 8e-33 Identities = 460/699 (66%), Gaps = 16/699 (2%) Strand=Plus/Minus Query 475477 AGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTAC 475536 ||| || ||| | || ||||||||||| || | |||||| || || | |||||| || | Sbjct 189813 AGCTTTGAGAAGACTAAGAACTGCTTGCGAGAGAGCTAAGAGAACTTTGTCTTCTTCTGC 189754 Query 475537 TCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTAC 475596 |||||| | || ||| | || || || | ||| || ||||| | | ||| | || Sbjct 189753 TCAAACCTCCGTCGAAATCGACTCCCTATATGAGGGTATTGACTTCTACACTTCCTTGAC 189694 Query 475597 AAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGA 475656 || || | |||||| || | ||| |||||| || ||| || | || || || || Sbjct 189693 TAGAGCCAGATTTGAGGAATTGTGTGGTGATCTGTTCAGATCCACTCTAGACCCAGTCGA 189634 Query 475657 ACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGG 475716 | || | ||||| | || |||||||| || || || |||||||||||||| || Sbjct 189633 GAAGGTCTTGAGAGACGCCAAGCTTGACAAGTCTGCCGTTCACGAAATTGTTCTTGTCGG 189574 Query 475717 AGGTTCAACAAGAATTCCAAAAAT-AAGAGAAATGCTTTCATCATATTTTAATGGTAAAA 475775 ||||| || ||||||||||| || ||| | || || | || || ||||| Sbjct 189573 TGGTTCTACTAGAATTCCAAAGATCCAGA-AGCTGGTTAGCGACTTCTTCAACGGTAAGC 189515 Query 475776 AGTTAAATGAAAGT--GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGC 475833 || ||| |||| | ||||| ||||| ||||| || || || ||||| |||||||| Sbjct 189514 AGCCAAA--CAAGTCCATCAATCCAGATGAGGCTGTGGCTTACGGTGCTGCCGTCCAAGC 189457 Query 475834 AGCTATTTTATCAGGT---CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGT 475890 || || || | ||| || || | ||| || | || | | || | || || Sbjct 189456 TGCCATCTTGACTGGTGACCAGTCCTCCAAGACAC---AGGATTTGTTGCTGCTAGATGT 189400 Query 475891 AACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAG 475950 ||||| | || | ||| |||| || | ||| || | ||||| || | ||| || Sbjct 189399 TGCTCCATTGTCGCTTGGTATTGAGACCGCTGGTGGTGTCATGACCAAGTTGATTCCAAG 189340 Query 475951 AAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAAC 476010 ||| | |||| ||| ||| || || || |||||||| | || || || | Sbjct 189339 AAACTCCACTATTCCAACCAAGAAGAGTGAAACCTTCTCCACTTACGCCGACAACCAGCC 189280 Query 476011 AACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACT 476070 | ||| || || ||| |||||||| || || || || || ||| | Sbjct 189279 AGGTGTGTTGATTCAGGTCTACGAAGGTGAGAGGGCCAGAACGAAGGACAACAACTTGTT 189220 Query 476071 TGG-AACTTTTAATCTTGA-AGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAA 476128 || || || || |||| |||||||| || ||||| ||||| |||||||| ||||| Sbjct 189219 GGGTAAATTCGAA--TTGAGTGGTATTCCACCAGCTCCAAGAGGTGTTCCTCAGATTGAG 189162 Query 476129 GTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTT 476167 ||||| |||||| |||| | || ||||| | |||||| Sbjct 189161 GTTACCTTTGATGTTGACTCTAACGGTATCTTGAATGTT 189123 >seq70 Length=181133 Score = 131 bits (144), Expect = 1e-24 Identities = 163/222 (73%), Gaps = 1/222 (0%) Strand=Plus/Plus Query 480561 AGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCT 480620 || |||||||| || || ||||| || || || |||| |||||||| ||| Sbjct 22048 AGCACAAGATGTAGGGTCGACTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCCATCC 22107 Query 480621 TCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCT 480680 || |||||||| || ||||| || | | ||||| || || ||||| || |||||||| Sbjct 22108 TCCAGTTGCTTACCTGCAAAGATCAATCTCTGTTGGTCGGGCGGAATGCCCTCCTTGTCC 22167 Query 480681 TGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTT 480740 |||||||| ||||||| ||||| ||||||| | | | ||| || |||||||| Sbjct 22168 TGAATCTTGGATTTGACATTGTCAATGGTATCAGAGGATTCAACTTCGAGTGTAATAGTC 22227 Query 480741 TTACCGGTGAGAGTCTTAACGAAAATTTGGA-ACGACATCTT 480781 |||||||| ||||||||||| ||||| || | || || |||| Sbjct 22228 TTACCGGTAAGAGTCTTAACAAAAATCTGCATACCACCTCTT 22269 Score = 104 bits (114), Expect = 2e-16 Identities = 137/189 (72%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 ||||| |||| ||||||||| ||| || || ||||| || ||||| || | | |||| Sbjct 22309 TTATAGTCAGATAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGT 22368 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || ||||| || || ||||| || || || ||||| || || || ||||| ||| Sbjct 22369 TGGTCAGGTGGGATACCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCA 22428 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTGGA-A 480772 | | | | ||||| |||||||| ||||| || ||||||||||| ||||| || | | Sbjct 22429 GAGGATTCAACCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCATA 22488 Query 480773 CGACATCTT 480781 | || |||| Sbjct 22489 CCACCTCTT 22497 Score = 104 bits (114), Expect = 2e-16 Identities = 137/189 (72%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 ||||| |||| ||||||||| ||| || || ||||| || ||||| || | | |||| Sbjct 22537 TTATAGTCAGATAGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGT 22596 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || ||||| || || ||||| || ||||| ||||| || || || ||||| ||| Sbjct 22597 TGGTCAGGTGGGATACCTTCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCA 22656 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTGGA-A 480772 | | | | ||||| |||||||| ||||| || ||||||||||| || || || | | Sbjct 22657 GAGGATTCAACCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCATA 22716 Query 480773 CGACATCTT 480781 | || |||| Sbjct 22717 CCACCTCTT 22725 Score = 89.7 bits (98), Expect = 3e-12 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652 ||| ||||||| || ||||||| ||| || | ||||| || || || || | | ||| Sbjct 22992 ATTGTAATCAGATAAAGTTCTGCCATCCTCCAACTGCTTACCTGCGAAGATCAATCTTTG 23051 Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 |||||||| || || ||||| || || || ||||| || || || ||||| || Sbjct 23052 CTGATCAGGTGGGATGCCTTCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTC 23111 Query 480713 AGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || | | ||||| |||||||| ||||| || ||||||||||| ||||| || Sbjct 23112 AGAGGATTCGACCTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTG 23168 >seq40 Length=692676 Score = 118 bits (130), Expect = 7e-21 Identities = 134/177 (76%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 ||||| |||| | |||||| ||| || | |||||| |||||||| || | | || Sbjct 222373 TTATAGTCAGACAAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGC 222314 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 |||||||| ||||| ||||||||||||||||||||| |||||| || ||||| ||| Sbjct 222313 TGATCAGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCGATAGTGTCA 222254 Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | ||||||||||||||| ||||| || | ||||| |||||||| || Sbjct 222253 GAAGACTCGA-CTTCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTG 222198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268174696040540