Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq27 414 7e-110 seq103 147 2e-29 seq54 96.9 3e-14 seq37 86.0 5e-11 >seq27 Length=444971 Score = 414 bits (458), Expect = 7e-110 Identities = 979/1456 (67%), Gaps = 32/1456 (2%) Strand=Plus/Minus Query 281381 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 281440 ||||| || ||||||| |||| || ||| || || |||||| ||||| ||| Sbjct 194929 TTAGTGATCGTAATATGATTGGTCTTACCGGTTCCCTTTTCTACGGCAGAGACATTTAGA 194870 Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 |||||||| ||||| | ||| || || ||||||||||||||||| || | |||| ||| Sbjct 194869 ATACCATTAGCATCAACATCGAAAGTAACTTCAATTTGAGGGACACCACGAGGAGCTGGT 194810 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 ||||| || ||| | || | |||| ||| || || || || | | ||| Sbjct 194809 GGGATACCGCTCAACTCGAACTTACCCAACAGATTGTTGTCCTTCGTCTTAGTCCTCTCA 194750 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT- 281619 || ||| | | ||||| || | | ||||| |||| || || | ||| ||| Sbjct 194749 CCTTCGTACACCTGGATCAACACGCCCGGCTGATTGTCTGCGTAGGTGGAAAAGG-TCTC 194691 Query 281620 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679 ||| || || ||| || || | ||||||| ||| | |||||||| |||||||| || Sbjct 194690 GGACTTCTTCGTAGGGATAGTAGAGTTTCTAGGAATCAATTTGGTCATGATACCACCGGC 194631 Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTC 281739 ||||| | |||||| || | |||| ||||| | ||| | | | || |||||| Sbjct 194630 AGTTTCAATACCAAGCGACAATGGAGCCACATCCAATAGCAACAAGTCCTGC-GTTTTTG 194572 Query 281740 ATCAGT--TTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 281797 | | | | | | ||| ||| || ||||| | |||||||| ||||||||||||||| Sbjct 194571 AGGACTGATCGCCGGTCAA-AATGGCAGCTTGCACGGCAGCACCGTATGCAACAGCTTCA 194513 Query 281798 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT 281857 ||||| || | || | || | | ||| ||| || ||| || | ||||| ||| Sbjct 194512 TCAGGGTTGATAGACTTGTTGGGCTCTTTGCCAGAAAAGAAACCAGATACAAGTT-TCTG 194454 Query 281858 -ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATC 281916 | | | || || | || |||||||| || | ||| ||||| |||||||| || || || Sbjct 194453 GATCCTTGGGATTCTAGTAGATCCTCCGACAAGTACGATTTCCTGCACCTGAGACTTGTC 194394 Query 281917 CAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGA 281976 | || | || || || || ||||| || || | | ||| |||| ||||| Sbjct 194393 GACCTTCGCGTCTCTCAACACCTTCTCAACAGGCTCCAATGTGGATCTGAACATGTCTGC 194334 Query 281977 ACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAAC 282034 ||| || ||||| ||| | ||||| || | ||| | || || ||||| |||||| || Sbjct 194333 ACATAGCTCTTCAAATCTTGCTCTGGTCAC--TGAGGTGTAGAAGTCAATACCTTCGTAC 194276 Query 282035 AAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCA 282094 |||||||||| ||| | | ||| || || | ||||| || || | ||| || | || Sbjct 194275 AAAGAATCAATTTCTACTGAAGTCTGCGTGGCCGAAGAAAGCGCTCTTTTGGCTCTCTCG 194216 Query 282095 CATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG---ATTCAAATCTGTTTTATAT 282151 || || || ||||||| ||||| | | ||| ||| ||| | ||| | ||||| Sbjct 194215 GCGGCAGTTCTCAGTCTTCTTAAGGATCT--CTGGTTGCCCATT-AGATCCTTCTTATAC 194159 Query 282152 TTTCTCTTGAAATCTTCAACACACCATGTTA-CAAGACGATTATCAAAATCTTCACCTCC 282210 ||||||||||| || | | || |||| | | | ||| |||||||||||||| || Sbjct 194158 TTTCTCTTGAACTCAGCTGC-CAGATGGTTAACCAATCTATTGTCAAAATCTTCACCACC 194100 Query 282211 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 282270 || | ||||| || | || || | |||| || | || || || | |||||| || Sbjct 194099 CAGATGAGTATCACCGGCAGTGGCCTTGACTTCAAATATACCTTCATCGATAGACAACAG 194040 Query 282271 AGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT---GTC 282327 | |||||| || |||||||||| || || || | || || || || | | Sbjct 194039 CGACACATCAAAAGTACCACCACCCAAGTCGAAGATTAAAACGTT--TTGCTCACCAGAC 193982 Query 282328 TTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAA 282387 || || || |||||||| || || | ||||| || || ||||| ||||| || | ||| Sbjct 193981 TTT-TTCTTGTCAAGACCGTAAGCGATTGCAGCTGCTGTGGGTTCGTTAATGATACGCAA 193923 Query 282388 AACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAA 282447 ||| || || || |||||| | || ||||| || || |||||||| || ||||||||||| Sbjct 193922 AACGTTTAGCCCCGCAATTGTACCCGCATCCTTTGTTGCTTGTCTCTGAGAATCGTTAAA 193863 Query 282448 ATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGT 282507 || || || || || | ||||||||| | || || || | ||| | ||| || Sbjct 193862 GTAAGCGGGCACCGTTACGACGGCATCTTTGACCTCACCGCCTAGATACCCTTCTGCCGT 193803 Query 282508 TTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTC 282567 || |||||| || | |||||||| || || |||| |||||| | | | |||| || Sbjct 193802 TTCTTTCATCTTGCCCAAAATCATCGAAGATATTTCTTCTGGGGTAAACAGCTTCTGCTC 193743 Query 282568 ATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATT---AATAACTTTAAATGG 282624 | || ||| || || | ||| || ||| | || ||| ||||| || || Sbjct 193742 ACCTTTGTATTCCACGCTAATCTGTGG---CTTGCCATCCTTGTCAATTACTTTGAAAGG 193686 Query 282625 CCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTT 282684 | | || ||| | ||| | |||||| ||| | ||||||||| | || || Sbjct 193685 GAAGTGCTTAGCATCATTTATAACCTCTGGGTCATCAAACTTTCTACCAATCAGACGCTT 193626 Query 282685 TGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAAT 282744 || ||||| | ||||| ||||| | || || || | ||||| ||||| ||||| Sbjct 193625 AGCGTCAAACACGGTATTTTCAGGATTGATGGCTGCCTGGTTCTTGGCGGCATCACCAAT 193566 Query 282745 CAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATT 282804 | |||||| ||||| || | |||||| ||||| || || | |||||||| ||||| Sbjct 193565 TAATCTTTCTGTATCTGTGAAGGCAACATACGATGGGGTAGTTCTGTTACCTTGGTCATT 193506 Query 282805 CGCAATAATTTCAACT 282820 |||||||| || ||| Sbjct 193505 AGCAATAATCTCCACT 193490 >seq103 Length=1149457 Score = 147 bits (162), Expect = 2e-29 Identities = 452/690 (66%), Gaps = 17/690 (2%) Strand=Plus/Minus Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253 |||||||||||||| ||||| | ||| | || | || ||| || | || | || Sbjct 560485 TCAAAATCTTCACCACCCAAATGAGTGTCACCAGCAGTTGCTTGGACCTCAAAGACACCG 560426 Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313 | || | |||||| | || ||||||| || |||||||| | ||| | | || | Sbjct 560425 TTCTCGATAGACAACAAAGAAACATCAAAAGTACCACCACCAAGATCGTAGACAATAA-- 560368 Query 282314 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 282373 || | | ||| | | || || |||||||| |||| ||| ||||| || || || Sbjct 560367 -TCTGATGCTCGTCATTGGACTTGTCCAGACCATAGGCAATAGCTGCAGCTGTAGGCTCG 560309 Query 282374 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 282433 || | |||||||||||| || | |||||||| | |||||||| ||||| || ||||| Sbjct 560308 TTCACAATTCTCAAAACGTTCAAGCCAGCAATAGTACCTGCATCCTTAGTTGCCTGTCTC 560249 Query 282434 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATA 282493 || | ||| ||||| || ||||| || || | ||| || | ||||| | ||||| | | Sbjct 560248 TGGGCATCATTAAAGTAAGCAGGCACCGTCACAACAGCGTGCGTTACCTTCTTTCCTAGA 560189 Query 282494 TAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG-- 282551 || | || |||| |||||||| | ||| | ||| ||||| | || || | Sbjct 560188 TAGTCCTCGGCAATTTGCTTCATTTTCCCTAATACCATACCAGAAATCTCCTCGGGGGTA 560129 Query 282552 AATATTGCTTGGATTCA--TTTTGATATGATACTTCAAAATATGGTTTATTACC--AACA 282607 || ||| | |||| |||| | || ||||| | || | || || Sbjct 560128 AAGATT--CTCTCTTCACCTTTTACTGTG--ACTTCGACTGCCGGCT--TTCCCTTGTTG 560075 Query 282608 TTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT 282667 | || ||||| |||||| | | ||| || || |||||| || |||||| ||| | Sbjct 560074 TCGATCACTTTGAATGGCAAGTGTTTAATGTCACGCTGAACAGATTTGTCATT-AAAGCG 560016 Query 282668 CTA-CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATA 282726 | | ||||| || || || |||||||| || || || || | || |||| | Sbjct 560015 CAATCCAATCAAACGCTTGATGTCAAAAATGGTGTTCTGGGGGTTGGCAGCTACTTGGTT 559956 Query 282727 TTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGT 282786 || || ||||| || |||| |||| ||||| || | || || || || || | Sbjct 559955 CTTTGCAGCATCACCGATCAATCTTTCTTCATCTGTGAACGCCACGTAGGAGGGTGTGAT 559896 Query 282787 GCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 282846 || |||||||| ||||| || | ||||||| ||| || || | | ||| | ||||| Sbjct 559895 ACGGTTACCTTGCTCATTGGCCAAAATTTCAGTTTTTCCGTTCTTCATCACAGCAACACA 559836 Query 282847 ACTAAAAGTTGTTCCTAAATCAATACCAAT 282876 | | || || ||||| || ||||| || Sbjct 559835 CGAATAGGTAGTACCTAAGTCGATACCGAT 559806 >seq54 Length=432084 Score = 96.9 bits (106), Expect = 3e-14 Identities = 165/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 432279 AGATTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATG 432338 ||||||| ||||||||||| |||||||||||||| | ||||| |||||||| ||| | Sbjct 202168 AGATTGAAGGGTAAAGAAGGCCGTATTAGAGGAAACCTAATGGGCAAGCGTGTGGATTTT 202227 Query 432339 TCTGCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCT 432398 |||||| | || || ||| | |||||| ||| | | | | |||| |||| ||| Sbjct 202228 TCTGCAAGGACTGTGATTTCGGGTGATCCAAATTTGGAATTGGACCAAGTCGGTG-TCCC 202286 Query 432399 CTCAT-TATTGCGAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGATTA 432457 | || || || |||| |||||||| | ||| | ||||| | ||||| ||| Sbjct 202287 CAAATCCATCGCCAAAACTCTTACTTATCCAGAAGTGGTAACTCCGTACAATATCGATCG 202346 Query 432458 TTTGACTCAATTAGTGAAAAATGGTAAAAGAGTATATCCAGGTGCCAATTTTGTAAT 432514 ||||||||| | || || || | | | ||||||||||||| | ||| || Sbjct 202347 TTTGACTCAGCTTGTACGTAACGGACCTAATGAACATCCAGGTGCCAAATATGTGAT 202403 >seq37 Length=613404 Score = 86.0 bits (94), Expect = 5e-11 Identities = 103/134 (77%), Gaps = 6/134 (4%) Strand=Plus/Plus Query 432291 AAAGAAGGTCGTATTAGAGGAA--ATTTGATGGGAAAGCGTGTCGA-TATGTCTGCACGT 432347 |||||||||| |||| ||||| || ||||||| |||||||| | |||| | || ||| Sbjct 469576 AAAGAAGGTC-TATTT-AGGAAGCATATGATGGGTAAGCGTGTTAACTATG-CAGCTCGT 469632 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 | || ||| || |||| |||||||||| |||||| |||||||||||| | || || Sbjct 469633 TCTGTGATTTCTCCTGACCCTAATATTGAGACAAATGAAATTGGTGTTCCTCCCGTTTTT 469692 Query 432408 GCGAAAAATCTTAC 432421 || || || ||||| Sbjct 469693 GCCAAGAAACTTAC 469706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740625244943730