Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq47 187 6e-42 seq54 120 7e-22 seq36 109 1e-18 seq103 84.2 5e-11 >seq47 Length=438083 Score = 187 bits (206), Expect = 6e-42 Identities = 523/797 (66%), Gaps = 7/797 (1%) Strand=Plus/Minus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 || || |||||||| ||| | |||||| | || || ||| | ||||| || | Sbjct 246350 TACTTCGGTTTCAAGACTTTGGAACGTTCATACTTGCTTAAAATTAATGGTTCAGTCGCT 246291 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 || | |||||||| | | | | ||| || |||| ||||| || |||||||||| Sbjct 246290 GAGAGACCTCAACATTTAATAATGAGAGTTTCGCTTGGCATTCACGGTGATGATATTAAG 246231 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483 || | |||||| ||| | || | | || | | || || ||| | ||||| Sbjct 246230 GCAGCTATTGAGACTTACAACCTAATGTCTCTAAGGTATTTCATCCACGCTTCCCCTACG 246171 Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAAC 110543 ||||| || |||||||| || ||||||||||||| || ||| || || Sbjct 246170 CTATTCAATGCAGGAACCCCACATCCTCAGATGGCTTCTTGCTTCCTGGTAGCCATGAAA 246111 Query 110544 GATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAAC 110603 ||||| ||||| || ||||| ||||| |||| |||||| |||| | || || || | Sbjct 246110 GATGACTCTATCGAGGGTATCTATGACACTCTAAAAGAATGTGCTATGATCTCCAAGACT 246051 Query 110604 TCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAACA 110663 |||| || |||||| | || | || |||| || |||| || | |||| || Sbjct 246050 GCTGGTGGTATTGGTTTGCATATCCACAATATCCGTTCAACTGGTTCGTATATTGCTGGT 245991 Query 110664 GCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAA 110723 | || ||| | || | |||||| | || ||| | | || || || | ||||| Sbjct 245990 ACCAACGGTACATCTAATGGACTAATCCCCATGATTCGTGTTTTTAATAATACTGCTCGG 245931 Query 110724 TATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGG 110780 |||||| | |||||||| ||| ||| |||| | ||||| | ||| | || || ||| Sbjct 245930 TATGTGGACCAAGGTGGTAATAAAAGACCTGGCGCTTTTGCCCTATATTTGGAGCCCTGG 245871 Query 110781 CATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGA 110840 || | ||||| ||||| || | || || | |||||||| || || || | Sbjct 245870 CACGCTGATATTTTTGATTTTATCGACATTAGGAAAAATCACGGTAAGGAGGAGATTCGC 245811 Query 110841 GCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAA 110900 || | ||||| ||| || | |||||||| || ||||| ||||| ||||| || | Sbjct 245810 GCCAGAGATTTGTTTCCAGCGTTATGGATTTCCGACTTATTTATGAAGCGTGTAGAACAG 245751 Query 110901 AATGGCATGTGGTCTCTTATGTGTCCTCATCG-TTCTCCTGGTCTATCTGATGTATATGG 110959 || || ||| | ||| | | ||| | || | || ||| |||||||||| || || Sbjct 245750 AACGGAGAATGGACCCTTTTCTCCCCT-AGCGAAGCGCCAGGTTTATCTGATGTTTACGG 245692 Query 110960 AAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAAT 111019 ||||||||||||| || || |||| |||||| ||||||| | | || ||| Sbjct 245691 GAAAGAGTTTGAAGCGCTATATGAAAGATATGAGCAAGAAGGGCGTGGTAGAAAGACAAT 245632 Query 111020 TCCAGCTCAAGAACTT-TGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTT 111078 |||| |||| || |||| | ||||| ||| | || |||||||| || |||| Sbjct 245631 AAGGGCTC-AGAAGTTGTGGTACGCCATCCTCGAAGCTCAGACAGAAACTGGTACACCTT 245573 Query 111079 ATATTTTGTATAAAGAT 111095 ||| || || || ||| Sbjct 245572 TTATGTTATACAAGGAT 245556 >seq54 Length=432084 Score = 120 bits (132), Expect = 7e-22 Identities = 147/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389 || |||||||| | || || || |||| |||||||||||||||||||| | |||||| Sbjct 202510 GTACTGTTCAACCGTCAGCCTTCCTTGCACAAAATGTCTATGATGGCTCACAGGGTCAAA 202569 Query 305390 GTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTA--CGCCTTATAATGCGG 305447 || | || | || ||| || | ||| | || | | | ||||| ||||| | Sbjct 202570 GTGATGCCTTTCTCAACCTTTAGACTGAATTT--GTCCGTCACATCTCCTTACAATGCAG 202627 Query 305448 ATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGGTTACAATGACTGAAT 305507 |||||||||| |||||||||||| ||||||| || |||||| ||| |||| | ||||| Sbjct 202628 ATTTTGATGGTGATGAAATGAATTTGCATGTTCCACAATCAGAGGAAACAAGGGCTGAAC 202687 Query 305508 TATCAGAAATATGTTCTGT 305526 |||| || ||||| |||| Sbjct 202688 TATCTCAATTATGTGCTGT 202706 >seq36 Length=192470 Score = 109 bits (120), Expect = 1e-18 Identities = 351/537 (65%), Gaps = 11/537 (2%) Strand=Plus/Plus Query 110465 TATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAAT-TGGCTTCTT 110523 ||| ||||| | |||||| | ||||| || || ||| | | | || || | || | Sbjct 94975 TATACATGCATCGCCTACCTTGTTTAATGCCGGTACTG-TCAATCAGTATCTGTCATCAT 95033 Query 110524 GCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAA 110583 ||||||| || | || || || ||||| ||||| || |||| | | | || | || | Sbjct 95034 GCTTTCTCGTAAGCATGAAAGAAGATTCCATTGATGGCATTTTTAAGACGCTACATGAGA 95093 Query 110584 CTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAA 110643 | ||| | ||||| || ||| || ||||| ||||| || ||| | || | | Sbjct 95094 CAGCTTTAATTTCAAAGGCCTCCGGGGGAATAGGTATCCATGTTTCCAACATAAGAGGCA 95153 Query 110644 AAGGAGCAAA--TATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAG 110701 || || | ||||| | || || | ||| | |||| | ||||| ||| | | Sbjct 95154 GCGGTGCCTACGTATCGGGGT--CTAACGGAGTTTCCAATGGATTAGTTCCTATGCTTCG 95211 Query 110702 AGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCAT- 110757 || |||||| |||| || | |||||| ||||||| ||||| | || || | | Sbjct 95212 TGTTTTCAACAACACGGCCAGATATGTCGATCAAGGAGGTAATAAAAGACCGGGAGCCTA 95271 Query 110758 TTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAA 110817 |||| || || | || || |||||||||||| | || || || || |||| | |||| Sbjct 95272 TTGC-ATTTACTTGGAGCCCTGGCATTCAGATGTCTTCGACTTTTTGCAACTCAGAAAAA 95330 Query 110818 ATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATT 110877 | || ||| || || | || || | ||||||||| || | |||||| |||| | Sbjct 95331 ACCACGGAAAAGAGGAGCTCAGGGCTAGAGATTTATTTCTAGCTTTATGGATTCCAGACT 95390 Query 110878 TATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTC 110937 |||||||||| | || ||| || || |||| | | | |||| || | | Sbjct 95391 TATTCATGAAGAGGGTGCAATCCAACGGAGAATGGTGTTTATTCAGTCCAGATGAAGCGC 95450 Query 110938 CTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAA 110994 | || || ||||| ||||| | || |||||||| | || ||||||||||||| Sbjct 95451 CAGGGTTAAACGATGTTTATGGGGAGGAATTTGAAGAATTGTATGAAAAATATGAAA 95507 >seq103 Length=1149457 Score = 84.2 bits (92), Expect = 5e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 131804 AAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTCTACAAGACTT 131863 || || || |||||||| | |||||||||||||| ||| || || || || Sbjct 422971 AAGGCTGAGTGGGCTATCAGGTGGATTCAAGATGACAATGCTCTTTACGCTGAGAGGCTG 423030 Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGG 131923 || || ||||| || |||||||| || || || || |||| || ||||||||| Sbjct 423031 GTGGCATTTGCCGCAGTAGAAGGTATCTTTTTCTCGGGATCTTTTGCCGCCATCTTTTGG 423090 Query 131924 CTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGAT 131983 || || ||| || | ||||| || || | || || || | || |||| |||||| Sbjct 423091 CTCAAAAAGAAGGGCCTCATGCCAGGCCTGACCTTTTCAAACGAGTTAATCTGTAGAGAT 423150 Query 131984 GAAGCATTGCATACTGAATTTGCT 132007 |||| |||||| || || |||||| Sbjct 423151 GAAGGATTGCACACAGACTTTGCT 423174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186811203365905