Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq70 118 3e-21 seq34 98.7 2e-15 seq40 84.2 5e-11 >seq70 Length=181133 Score = 118 bits (130), Expect = 3e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| | || || || || || || || || ||||| ||||||| Sbjct 22940 CAGATTTTTGTTAAAACATTGACCGGCAAGACTATTACATTAGAGGTGGAGTCTTCTGAC 22881 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| ||||| ||||| |||||||| || || ||| ||| Sbjct 22880 ACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAACAA 22821 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | ||||| || || |||||| |||| |||||||| ||| | | || || ||| | Sbjct 22820 AGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAACATT 22761 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || |||||||| ||| | || || ||||||||||| Sbjct 22760 CAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACT 22726 Score = 114 bits (126), Expect = 3e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || || || || || || || | || || ||| |||||| Sbjct 23168 CAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTCGAATCCTCTGAC 23109 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| ||||| || || |||||||| || || || ||| Sbjct 23108 ACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGCATCCCACCTGATCAGCAA 23049 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | |||||||| || ||||||||||| ||||| || ||||| | |||||||| || Sbjct 23048 AGATTGATCTTCGCAGGTAAGCAGTTGGAGGATGGCAGAACTTTATCTGATTACAATATC 22989 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || || || || ||||| ||||| ||||||||| Sbjct 22988 CAAAAGGAATCAACTCTACACCTCGTTTTGAGA 22956 Score = 113 bits (124), Expect = 1e-19 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || || || || || || || || | || || ||| |||||| Sbjct 22712 CAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCTGAC 22653 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| ||||| ||||| |||||||| || || ||| ||| Sbjct 22652 ACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAACAA 22593 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | ||||| || || |||||| |||| |||||||| ||| | | || || ||| | Sbjct 22592 AGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAACATT 22533 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || |||||||| ||| | || || ||||||||||| Sbjct 22532 CAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACT 22498 Score = 100 bits (110), Expect = 7e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || || || || || || || | || || ||| |||||| Sbjct 22484 CAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCTGAC 22425 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| ||||| || || |||||||| || || ||| ||| Sbjct 22424 ACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAACAA 22365 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | ||||| || || |||||| |||| |||||||| ||| | | || || ||| | Sbjct 22364 AGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAACATT 22305 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || |||||||| || | || || ||||||||||| Sbjct 22304 CAAAAAGAGTCAACATTGCATCTGGTTTTGAGACT 22270 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814 ||||||||||| || || | ||| |||||||| || | |||||||||| | ||| ||| Sbjct 22498 AGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTT 22557 Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||| ||||||||||| || || ||||| | | |||||| Sbjct 22558 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTG 22598 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814 ||||||||||| || || | ||| |||||||| || | |||||||||| | ||| ||| Sbjct 22726 AGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTT 22785 Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||| ||||||||||| || || ||||| | | |||||| Sbjct 22786 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTG 22826 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814 ||||||||||| || || | || |||||||| || | |||||||||| | ||| ||| Sbjct 22270 AGTCTCAAAACCAGATGCAATGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTT 22329 Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||| ||||||||||| || || ||||| | | |||||| Sbjct 22330 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTG 22370 >seq34 Length=390617 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || ||||||||||| || ||| || ||||| | || || ||| Sbjct 329725 ACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCCGACACTATTGACAATGTCAAGTCT 329666 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || || || ||| || ||| || ||| | || ||||| || ||| Sbjct 329665 AAGATTCAAGACAAGGAGGGTATTCCACCTGACCAGCAGAGATTGATTTTCGCTGGTAAG 329606 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 |||||||| ||||| || |||||| | || |||||| |||| || || || || | ||| Sbjct 329605 CAGTTGGAGGATGGCAGAACTTTGTCTGACTACAACATCCAAAAGGAATCCACCTTGCAC 329546 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 329545 TTGGTCTTGAGA 329534 >seq40 Length=692676 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || || || || | ||||| || ||||||| Sbjct 222198 CAGATTTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTTGAAGTCGAGTCTTCTGAC 222257 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||||||| || ||||| ||| || || || Sbjct 222258 ACTATCGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAGCAG 222317 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | ||||| || || ||||| ||||| ||||| || || ||| | || || ||| | Sbjct 222318 AGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTATAACATT 222377 Query 206353 CAGAAAGAGTCTAC 206366 ||||| || ||||| Sbjct 222378 CAGAAGGAATCTAC 222391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181819210081705