Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq103 118 2e-20 seq47 91.5 2e-12 >seq103 Length=1149457 Score = 118 bits (130), Expect = 2e-20 Identities = 246/354 (69%), Gaps = 12/354 (3%) Strand=Plus/Plus Query 1455963 AGAGGTCCAATTGCCAGAGGCACGTTTGTTT-TACGGGTTCCAGATCGCCATCGAAAACA 1456021 |||||| || | |||||||| | ||||| ||||||||||||||| || ||||| | Sbjct 422808 AGAGGTTCAGATACCAGAGGC-CAAATGTTTCTACGGGTTCCAGATCATGATGGAAAATA 422866 Query 1456022 TCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGG 1456081 |||| || || || ||||| | | ||||| || ||| ||||||| || || || Sbjct 422867 TCCATTCGGAGACTTACTCATTATTAATCGAGACATACATCAAGGATCCTAAGGAACGGG 422926 Query 1456082 ACCACCTCTTTCGCGCCATCGA-CACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCG 1456140 | | | ||| || || || ||| | || | | | | ||||||| || ||||| Sbjct 422927 ATTTCTTGTTTAATGCGATTGAGCACA-TCCCTCAGATCAAGGAAAAGGCTGAGTGGGCT 422985 Query 1456141 ATGAAGTGGATCAACAAGGAGGGCCTCGACACTTT--GCCGAGCGGCTCGTCGGCTTTGC 1456198 || | |||||| |||| | | | | | |||| || ||| |||| || | ||||| Sbjct 422986 ATCAGGTGGATT--CAAG-ATGACAATG-CTCTTTACGCTGAGAGGCTGGTGGCATTTGC 423041 Query 1456199 CGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCG 1456257 ||| || || || |||||||||||||| ||| |||||||||||||||||| ||| Sbjct 423042 CGCAGTAGAAGGTATCTTTTTCTCGGGATCTTTTGCCGCCATCTTTTGGCTCAAAAAGAA 423101 Query 1456258 CGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAAG 1456311 ||||||||||| || | | |||| ||||| || ||| || | || |||| Sbjct 423102 GGGCCTCATGCCAGG-CCTGACCTTTTCAAACGAGTTAATCTGTAGAGATGAAG 423154 >seq47 Length=438083 Score = 91.5 bits (100), Expect = 2e-12 Identities = 177/261 (68%), Gaps = 8/261 (3%) Strand=Plus/Minus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 || ||||| || ||||| || || || | || |||| | || ||||| ||| | | | Sbjct 246176 CCTACGCTATTCAATGCAGGAACCCCACATCCTCAGATGGCTTCTTGCTTCCTGGTAGCC 246117 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||| | || || |||||||| ||||||||||| || || | || || | |||||| Sbjct 246116 ATGAAAGATGACTCTATCGAGGGTATCTATGACACTCTAAAAGAATGTGCTATGATCTCC 246057 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCA----CACAAGGTGCGCGCCGCGGGCGCCTA 260100 ||| | || || || || ||||| ||| ||||| | || | | || | || Sbjct 246056 AAGACTGCTGGTGGTATTGGTTT----GCATATCCACAATATCCGTTCAACTGGTTCGTA 246001 Query 260101 CGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGA 260160 | || || |||||||| || || || || | |||||| |||| |||||||| | Sbjct 246000 TATTGCTGGTACCAACGGTACATCTAATGGACTAATCCCCATGATTCGTGTTTTTAATAA 245941 Query 260161 CACGGCGCGCTACGTCGACCA 260181 || || || || || ||||| Sbjct 245940 TACTGCTCGGTATGTGGACCA 245920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177801072557010