Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq40 105 6e-18 seq70 98.7 9e-16 >seq40 Length=692676 Score = 105 bits (116), Expect = 6e-18 Identities = 169/241 (70%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 35499 TCTCTTTATTTCCACCACGT---AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAA 35555 |||||| || ||||||| | || || | |||||| || || ||| ||||| |||| Sbjct 222434 TCTCTTC-TTACCACCACCTCTCAATCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAA 222376 Query 35556 TGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCT 35615 |||| || || | |||||||| | || |||| |||||||| ||||| ||||| | || Sbjct 222375 TGTTATAGTCAGACAAGGTTCTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTCT 222316 Query 35616 GCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGT 35675 |||| || | |||| | |||||||| |||||| ||| | | | | | |||| Sbjct 222315 GCTGATCAGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCGATAGTGT 222256 Query 35676 CGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 | || || || || | || || || ||||||||||| || || || || ||||||| Sbjct 222255 CAGAAGACTCGACTTCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCA 222196 Query 35736 T 35736 | Sbjct 222195 T 222195 >seq70 Length=181133 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | ||| || | ||| | ||||| || ||| |||||||||||||| || | Sbjct 22033 CCACCTCTTAATCTTAGCACAAGATGTAGGGTCGACTCTTTTTGAATGTTGTAGTCAGAA 22092 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| | || ||||| |||||||| ||||| ||||| | ||| ||||| | ||| Sbjct 22093 AGAGTTCTTCCATCCTCCAGTTGCTTACCTGCAAAGATCAATCTCTGTTGGTCGGGCGGA 22152 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||||| ||||| || | | | | | || || ||||| || Sbjct 22153 ATGCCCTCCTTGTCCTGAATCTTGGATTTGACATTGTCAATGGTATCAGAGGATTCAACT 22212 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || || || ||||| || | ||| || ||||| |||||||| Sbjct 22213 TCGAGTGTAATAGTCTTACCGGTAAGAGTCTTAACAAAAATCTGCAT 22259 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||| |||| ||| || || ||| ||||||||||| || || | Sbjct 22261 CCACCTCTTAGTCTCAAAACCAGATGCAATGTTGACTCTTTTTGAATGTTATAGTCAGAT 22320 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| | || |||||||||||||| ||||| ||||| | || ||||| | || Sbjct 22321 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 22380 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | || || ||| |||||| ||| | |||| | | ||||| ||||| || Sbjct 22381 ATACCTTCTTTATCCTGGATCTTCGACTTTA-CGTTGTCGATAGTGTCAGAGGATTCAAC 22439 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | || || || ||||| || | ||| || ||||| |||||||| Sbjct 22440 CTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 22487 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||| |||| ||| || || ||| ||||||||||| || || | Sbjct 22489 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 22548 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| | || |||||||||||||| ||||| ||||| | || ||||| | || Sbjct 22549 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 22608 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | || || || |||||| ||| | |||| | | ||||| ||||| || Sbjct 22609 ATACCTTCTTTATCTTGGATCTTCGACTTTA-CGTTGTCGATAGTGTCAGAGGATTCAAC 22667 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | || || || ||||| || | ||| || |||||||||||||| Sbjct 22668 CTCAAGTGTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 22715 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||| |||| ||| || || ||| ||||||||||| || || | Sbjct 22717 CCACCTCTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGAT 22776 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| | || |||||||||||||| ||||| ||||| | || ||||| | || Sbjct 22777 AGAGTTCTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGG 22836 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | || || || |||||| ||| | |||| | | ||||| || ||||| Sbjct 22837 ATACCTTCTTTATCTTGGATCTTCGACTTTA-CGTTGTCGATAGTGTCAGAAGACTCCAC 22895 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | || || || || || ||||| ||||| ||||| |||||||| Sbjct 22896 CTCTAATGTAATAGTCTTGCCGGTCAATGTTTTAACAAAAATCTGCAT 22943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793008333400