Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06-
15] 105 sequences; 10,772,966 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq70 152 6e-32
seq40 125 8e-24
seq34 120 3e-22
seq47 98.7 1e-15
>seq70
Length=181133
Score = 152 bits (168), Expect = 6e-32
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| |||||||| ||||||||||| || || ||||| || |
Sbjct 22259 ATGCAGATTTTTGTTAAGACTCTTACCGGTAAGACTATTACACTCGAAGTTGAATCCTCT 22200
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| ||| | || | || ||||||||||||||||| ||||| || |||||
Sbjct 22199 GATACCATTGACAATGTCAAATCCAAGATTCAGGACAAGGAGGGCATTCCGCCCGACCAA 22140
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | || ||||| ||||||||||| ||||||| | || || | ||||| ||
Sbjct 22139 CAGAGATTGATCTTTGCAGGTAAGCAACTGGAGGATGGAAGAACTCTTTCTGACTACAAC 22080
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
| ||||| || || || || ||||| ||
Sbjct 22079 ATTCAAAAAGAGTCGACCCTACATCTTGT 22051
Score = 122 bits (134), Expect = 1e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| ||||| || ||||||||||| ||||||||||| || |
Sbjct 22487 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 22428
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | || || ||||| || || || || || || |||||
Sbjct 22427 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 22368
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||| |||||||| || ||||||| | || ||| | ||||||||
Sbjct 22367 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22308
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||| || || || | ||||| || ||| | || | |||||
Sbjct 22307 ATTCAAAAAGAGTCAACATTGCATCTGGTTTTGAGACTAAGAGGTGG 22261
Score = 122 bits (134), Expect = 1e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| ||||| || ||||||||||| ||||||||||| || |
Sbjct 22715 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 22656
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | || || || || || || || || || || |||||
Sbjct 22655 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 22596
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||| |||||||| || ||||||| | || ||| | ||||||||
Sbjct 22595 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22536
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||| || || ||| | ||||| || ||| | || | |||||
Sbjct 22535 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGG 22489
Score = 114 bits (126), Expect = 1e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| ||||| || ||||||||||| |||||||| || || |
Sbjct 23171 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTCGAATCCTCT 23112
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | || || ||||| || || || || || || || |||
Sbjct 23111 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGCATCCCACCTGATCAG 23052
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || || || |||||||| | ||||||| | || || | || || |||
Sbjct 23051 CAAAGATTGATCTTCGCAGGTAAGCAGTTGGAGGATGGCAGAACTTTATCTGATTACAAT 22992
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||||||||| ||||| || || || |||
Sbjct 22991 ATCCAAAAGGAATCAACTCTACACCTCGTTTTG 22959
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| || || | ||||||||||||||||| | ||||| ||||| |
Sbjct 22943 ATGCAGATTTTTGTTAAAACATTGACCGGCAAGACTATTACATTAGAGGTGGAGTCTTCT 22884
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | || || || || || || || || || || |||||
Sbjct 22883 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 22824
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||| |||||||| || ||||||| | || ||| | ||||||||
Sbjct 22823 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22764
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||| || || ||| | ||||| || ||| | || | |||||
Sbjct 22763 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGG 22717
>seq40
Length=692676
Score = 125 bits (138), Expect = 8e-24
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| | || || ||||||||||| ||||| || ||||| |
Sbjct 222195 ATGCAGATTTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTTGAAGTCGAGTCTTCT 222254
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| | ||| | || ||||| |||||||| || ||||| || || |||
Sbjct 222255 GACACTATCGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAG 222314
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | || ||||||||||||||| | ||||||| | ||| | | ||||||||
Sbjct 222315 CAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTATAAC 222374
Query 27586 GTCCAAAAGGAATCCAC 27602
| || |||||||| ||
Sbjct 222375 ATTCAGAAGGAATCTAC 222391
>seq34
Length=390617
Score = 120 bits (132), Expect = 3e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| | || || ||||| || ||| | ||||| || || || | |||
Sbjct 329740 TTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCCGACACTATT 329681
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| |||| ||||| ||||||||||| ||||| || ||||||||| | |
Sbjct 329680 GACAATGTCAAGTCTAAGATTCAAGACAAGGAGGGTATTCCACCTGACCAGCAGAGATTG 329621
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
||||| ||||||||||| | ||||||| | || | | ||||| || ||||||||
Sbjct 329620 ATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCTGACTACAACATCCAAAAG 329561
Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618
|||||||| | || | ||||||
Sbjct 329560 GAATCCACCTTGCACTTGGTCTTG 329537
>seq47
Length=438083
Score = 98.7 bits (108), Expect = 1e-15
Identities = 519/819 (63%), Gaps = 11/819 (1%)
Strand=Plus/Plus
Query 80908 GACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCAC 80967
|| ||||||||||| || || || || ||| | | || || ||||| ||
Sbjct 245440 GAAGCCAGATTGCAAACTGCAGATTCATCCTTATCGGAGTATTCAACAATTTCACAACAA 245499
Query 80968 AAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCC 81027
| ||| || || ||||| ||||||||| || ||||| ||| | |||||||| |||
Sbjct 245500 AGATTGGATGATTTAATCACACCCAGGTTCTTTTGGTTACTCTTTTCATTGCAAGCATCC 245559
Query 81028 TTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATC 81087
||||| |||| | || ||||| || || ||| | | ||||||||||| ||| | |
Sbjct 245560 TTGTATAACATAAAAGGTGTACCAGTTTCTGTCTGAGCTTCGAGGATGGCGTACCACAAC 245619
Query 81088 TCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AGCTTC 81146
| | ||| | | ||| | ||||| | |||| | | || ||| |
Sbjct 245620 TTCTGAGCCCTTATTGTCTTTCTACCACGCCCTTCTTGCTCATATCTTTCATATAGCG-C 245678
Query 81147 GTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTG 81206
|| |||| |||| || |||| | |||| ||| ||||| | | |||
Sbjct 245679 TTCAAACTCTTTCCCGTAAACATCAGATAAACCTGGCGCTTCGCTAGGGGAGAAAAGGGT 245738
Query 81207 CCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAA 81266
||| || || | |||||| |||||| || ||| | ||||| | || | ||
Sbjct 245739 CCATTCTCCGTTCTGTTCTACACGCTTCATAAATAAGTCGGAAATCCATAACGCTGGAAA 245798
Query 81267 CAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCAT 81326
|| || | | ||| |||||| | ||| || || | | |||| ||| || |
Sbjct 245799 CAAATCTCTGGCGCGAATCTCCTCCTTACCGTGATTTTTCCTAATGTCGATAAAATCAAA 245858
Query 81327 GATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC----CTTGCGACGGCCAC 81382
|| || || ||||| ||||||| ||| | ||| | | || ||| | ||||
Sbjct 245859 AATATCAGCGTGCCAGGGCTCCAAATATAGGGCAAAAGCGCCAGGTCTTTT-ATTACCAC 245917
Query 81383 CCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTG 81442
| |||| || || || ||||| ||||| ||||| | ||| ||||| | |||| |
Sbjct 245918 CTTGGTCCACATACCGAGCAGTATTATTAAAAACACGAATCATGGGGATTAGTCCATTAG 245977
Query 81443 ACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGAT-TGAAAGA 81501
| |||||| ||||| | ||| ||| || | | || | ||| ||| || || |
Sbjct 245978 ATGTACCGTTGGTACCAGCAATATACGAACCAGTTGAACGGATATTGTGGATATGCAA-A 246036
Query 81502 CCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCC 81561
|| || ||||| | ||| || ||| |||||| || | || ||||| || |||
Sbjct 246037 CCAATACCACCAGCAGTCTTGGAGATCATAGCACATTCTTTTAGAGTGTCATAGATACCC 246096
Query 81562 TCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG 81621
||||| || | ||||||| | | || ||| || | ||||||||| | |
Sbjct 246097 TCGATAGAGTCATCTTTCATGGCTACCAGGAAGCAAGAAGCCATCTGAGGATGTGGGGTT 246156
Query 81622 CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAG 81681
|| |||||||| || || |||| ||||| |||||||| | ||||| |||| ||
Sbjct 246157 CCTGCATTGAATAGCGTAGGGGAAGCGTGGATGAAATACCTTAGAGACATTAGGTTGTAA 246216
Query 81682 GTTTCCTTGAC-GCGTGGAATATCGTCACCGTGAATACC 81719
|| || | | || | |||||| ||||||||||| ||
Sbjct 246217 GTCTCAATAGCTGCCTT-AATATCATCACCGTGAATGCC 246254
Score = 86.0 bits (94), Expect = 7e-12
Identities = 136/189 (72%), Gaps = 6/189 (3%)
Strand=Plus/Plus
Query 80031 TGCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTG 80090
|||| |||||| || |||||||| || ||||| |||||||| ||||| ||||| | |||
Sbjct 244539 TGCCTGCGTCCTCAAGTAGTACATACCTGTCTTCAGGCCCTTTTTCCAACCGTAAAAGTG 244598
Query 80091 CATAGAACTGAGCTT-CGCAAGTGTGGGGTTCTCC-ATGAAGATGTTCAGAGACTGAGAC 80148
|||| | || || | || | ||| | | | ||||| |||||| || || |||
Sbjct 244599 CATACTTGTTAGTTTACCCATGGTTGGAGCGCGCATATGAA--TGTTCAACGAGTGGGAC 244656
Query 80149 TGACAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAAT-TGACTTTTGTGGAATTTC 80207
||| ||||| || | || || || ||||| || ||||| || || | | | ||||||
Sbjct 244657 TGATCAATGAATGCAGCGCGGTCCGCGGCCATATCGATAATATGTCTCTGG-GAAATTTC 244715
Query 80208 CCATACTGT 80216
|||||| ||
Sbjct 244716 CCATACAGT 244724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309651467600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |