Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq70 152 6e-32 seq40 125 8e-24 seq34 120 3e-22 seq47 98.7 1e-15 >seq70 Length=181133 Score = 152 bits (168), Expect = 6e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| |||||||| ||||||||||| || || ||||| || | Sbjct 22259 ATGCAGATTTTTGTTAAGACTCTTACCGGTAAGACTATTACACTCGAAGTTGAATCCTCT 22200 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | || | || ||||||||||||||||| ||||| || ||||| Sbjct 22199 GATACCATTGACAATGTCAAATCCAAGATTCAGGACAAGGAGGGCATTCCGCCCGACCAA 22140 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || ||||| ||||||||||| ||||||| | || || | ||||| || Sbjct 22139 CAGAGATTGATCTTTGCAGGTAAGCAACTGGAGGATGGAAGAACTCTTTCTGACTACAAC 22080 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 | ||||| || || || || ||||| || Sbjct 22079 ATTCAAAAAGAGTCGACCCTACATCTTGT 22051 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| ||||| || ||||||||||| ||||||||||| || | Sbjct 22487 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 22428 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || || ||||| || || || || || || ||||| Sbjct 22427 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 22368 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||| |||||||| || ||||||| | || ||| | |||||||| Sbjct 22367 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22308 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| || || || | ||||| || ||| | || | ||||| Sbjct 22307 ATTCAAAAAGAGTCAACATTGCATCTGGTTTTGAGACTAAGAGGTGG 22261 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| ||||| || ||||||||||| ||||||||||| || | Sbjct 22715 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 22656 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || || || || || || || || || || ||||| Sbjct 22655 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 22596 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||| |||||||| || ||||||| | || ||| | |||||||| Sbjct 22595 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22536 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| || || ||| | ||||| || ||| | || | ||||| Sbjct 22535 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGG 22489 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| ||||| || ||||||||||| |||||||| || || | Sbjct 23171 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTCGAATCCTCT 23112 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || || ||||| || || || || || || || ||| Sbjct 23111 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGCATCCCACCTGATCAG 23052 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || || || |||||||| | ||||||| | || || | || || ||| Sbjct 23051 CAAAGATTGATCTTCGCAGGTAAGCAGTTGGAGGATGGCAGAACTTTATCTGATTACAAT 22992 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 ||||||||||||| ||||| || || || ||| Sbjct 22991 ATCCAAAAGGAATCAACTCTACACCTCGTTTTG 22959 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || || | ||||||||||||||||| | ||||| ||||| | Sbjct 22943 ATGCAGATTTTTGTTAAAACATTGACCGGCAAGACTATTACATTAGAGGTGGAGTCTTCT 22884 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || || || || || || || || || || ||||| Sbjct 22883 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 22824 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||| |||||||| || ||||||| | || ||| | |||||||| Sbjct 22823 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22764 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| || || ||| | ||||| || ||| | || | ||||| Sbjct 22763 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTGAGACTAAGAGGTGG 22717 >seq40 Length=692676 Score = 125 bits (138), Expect = 8e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| | || || ||||||||||| ||||| || ||||| | Sbjct 222195 ATGCAGATTTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTTGAAGTCGAGTCTTCT 222254 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | || ||||| |||||||| || ||||| || || ||| Sbjct 222255 GACACTATCGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAG 222314 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || ||||||||||||||| | ||||||| | ||| | | |||||||| Sbjct 222315 CAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTATAAC 222374 Query 27586 GTCCAAAAGGAATCCAC 27602 | || |||||||| || Sbjct 222375 ATTCAGAAGGAATCTAC 222391 >seq34 Length=390617 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| | || || ||||| || ||| | ||||| || || || | ||| Sbjct 329740 TTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCCGACACTATT 329681 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| |||| ||||| ||||||||||| ||||| || ||||||||| | | Sbjct 329680 GACAATGTCAAGTCTAAGATTCAAGACAAGGAGGGTATTCCACCTGACCAGCAGAGATTG 329621 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 ||||| ||||||||||| | ||||||| | || | | ||||| || |||||||| Sbjct 329620 ATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCTGACTACAACATCCAAAAG 329561 Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618 |||||||| | || | |||||| Sbjct 329560 GAATCCACCTTGCACTTGGTCTTG 329537 >seq47 Length=438083 Score = 98.7 bits (108), Expect = 1e-15 Identities = 519/819 (63%), Gaps = 11/819 (1%) Strand=Plus/Plus Query 80908 GACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCAC 80967 || ||||||||||| || || || || ||| | | || || ||||| || Sbjct 245440 GAAGCCAGATTGCAAACTGCAGATTCATCCTTATCGGAGTATTCAACAATTTCACAACAA 245499 Query 80968 AAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCC 81027 | ||| || || ||||| ||||||||| || ||||| ||| | |||||||| ||| Sbjct 245500 AGATTGGATGATTTAATCACACCCAGGTTCTTTTGGTTACTCTTTTCATTGCAAGCATCC 245559 Query 81028 TTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATC 81087 ||||| |||| | || ||||| || || ||| | | ||||||||||| ||| | | Sbjct 245560 TTGTATAACATAAAAGGTGTACCAGTTTCTGTCTGAGCTTCGAGGATGGCGTACCACAAC 245619 Query 81088 TCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AGCTTC 81146 | | ||| | | ||| | ||||| | |||| | | || ||| | Sbjct 245620 TTCTGAGCCCTTATTGTCTTTCTACCACGCCCTTCTTGCTCATATCTTTCATATAGCG-C 245678 Query 81147 GTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTG 81206 || |||| |||| || |||| | |||| ||| ||||| | | ||| Sbjct 245679 TTCAAACTCTTTCCCGTAAACATCAGATAAACCTGGCGCTTCGCTAGGGGAGAAAAGGGT 245738 Query 81207 CCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAA 81266 ||| || || | |||||| |||||| || ||| | ||||| | || | || Sbjct 245739 CCATTCTCCGTTCTGTTCTACACGCTTCATAAATAAGTCGGAAATCCATAACGCTGGAAA 245798 Query 81267 CAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCAT 81326 || || | | ||| |||||| | ||| || || | | |||| ||| || | Sbjct 245799 CAAATCTCTGGCGCGAATCTCCTCCTTACCGTGATTTTTCCTAATGTCGATAAAATCAAA 245858 Query 81327 GATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC----CTTGCGACGGCCAC 81382 || || || ||||| ||||||| ||| | ||| | | || ||| | |||| Sbjct 245859 AATATCAGCGTGCCAGGGCTCCAAATATAGGGCAAAAGCGCCAGGTCTTTT-ATTACCAC 245917 Query 81383 CCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTG 81442 | |||| || || || ||||| ||||| ||||| | ||| ||||| | |||| | Sbjct 245918 CTTGGTCCACATACCGAGCAGTATTATTAAAAACACGAATCATGGGGATTAGTCCATTAG 245977 Query 81443 ACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGAT-TGAAAGA 81501 | |||||| ||||| | ||| ||| || | | || | ||| ||| || || | Sbjct 245978 ATGTACCGTTGGTACCAGCAATATACGAACCAGTTGAACGGATATTGTGGATATGCAA-A 246036 Query 81502 CCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCC 81561 || || ||||| | ||| || ||| |||||| || | || ||||| || ||| Sbjct 246037 CCAATACCACCAGCAGTCTTGGAGATCATAGCACATTCTTTTAGAGTGTCATAGATACCC 246096 Query 81562 TCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG 81621 ||||| || | ||||||| | | || ||| || | ||||||||| | | Sbjct 246097 TCGATAGAGTCATCTTTCATGGCTACCAGGAAGCAAGAAGCCATCTGAGGATGTGGGGTT 246156 Query 81622 CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAG 81681 || |||||||| || || |||| ||||| |||||||| | ||||| |||| || Sbjct 246157 CCTGCATTGAATAGCGTAGGGGAAGCGTGGATGAAATACCTTAGAGACATTAGGTTGTAA 246216 Query 81682 GTTTCCTTGAC-GCGTGGAATATCGTCACCGTGAATACC 81719 || || | | || | |||||| ||||||||||| || Sbjct 246217 GTCTCAATAGCTGCCTT-AATATCATCACCGTGAATGCC 246254 Score = 86.0 bits (94), Expect = 7e-12 Identities = 136/189 (72%), Gaps = 6/189 (3%) Strand=Plus/Plus Query 80031 TGCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTG 80090 |||| |||||| || |||||||| || ||||| |||||||| ||||| ||||| | ||| Sbjct 244539 TGCCTGCGTCCTCAAGTAGTACATACCTGTCTTCAGGCCCTTTTTCCAACCGTAAAAGTG 244598 Query 80091 CATAGAACTGAGCTT-CGCAAGTGTGGGGTTCTCC-ATGAAGATGTTCAGAGACTGAGAC 80148 |||| | || || | || | ||| | | | ||||| |||||| || || ||| Sbjct 244599 CATACTTGTTAGTTTACCCATGGTTGGAGCGCGCATATGAA--TGTTCAACGAGTGGGAC 244656 Query 80149 TGACAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAAT-TGACTTTTGTGGAATTTC 80207 ||| ||||| || | || || || ||||| || ||||| || || | | | |||||| Sbjct 244657 TGATCAATGAATGCAGCGCGGTCCGCGGCCATATCGATAATATGTCTCTGG-GAAATTTC 244715 Query 80208 CCATACTGT 80216 |||||| || Sbjct 244716 CCATACAGT 244724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309651467600