Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq70 138 1e-27 seq40 125 6e-24 seq34 111 1e-19 >seq70 Length=181133 Score = 138 bits (152), Expect = 1e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||| ||||| ||| ||||||| || ||||| ||| | || Sbjct 22259 ATGCAGATTTTTGTTAAGACTCTTACCGGTAAGACTATTACACTCGAAGTTGAATCCTCT 22200 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | |||||| || ||||| ||||| || ||||| || ||||| ||| Sbjct 22199 GATACCATTGACAATGTCAAATCCAAGATTCAGGACAAGGAGGGCATTCCGCCCGACCAA 22140 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || ||| |||| || | || |||| || |||||| Sbjct 22139 CAGAGATTGATCTTTGCAGGTAAGCAACTGGAGGATGGAAGAACTCTTTCTGACTACAAC 22080 Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191 |||||||| ||||||||| ||||| Sbjct 22079 ATTCAAAAAGAGTCGACCCTACAT 22056 Score = 116 bits (128), Expect = 3e-21 Identities = 176/249 (71%), Gaps = 1/249 (0%) Strand=Plus/Minus Query 26969 ATTTTTTAATTTATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTAC 27028 ||||| ||| ||| || |||||||| ||||| || ||||| || || ||| ||||||| Sbjct 23189 ATTTTATAACCGATAGGC-ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTAC 23131 Query 27029 TCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGA 27088 ||||| || ||| | || ||| | || || | || || || || || || ||||| Sbjct 23130 ACTTGAGGTCGAATCCTCTGACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGA 23071 Query 27089 AGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTC 27148 |||||| ||||| ||||| || | || || | ||| || || || ||||| || | Sbjct 23070 AGGCATCCCACCTGATCAGCAAAGATTGATCTTCGCAGGTAAGCAGTTGGAGGATGGCAG 23011 Query 27149 GACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCG 27208 || | || |||||||| || |||||||| || || |||| | |||||| | || | Sbjct 23010 AACTTTATCTGATTACAATATCCAAAAGGAATCAACTCTACACCTCGTTTTGAGATTAAG 22951 Query 27209 GGGTGGCAT 27217 ||||| || Sbjct 22950 AGGTGGTAT 22942 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || ||||| || || ||| ||||||| ||||| || ||| | || Sbjct 22715 ATGCAGATATTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 22656 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || ||||| |||||||| || ||||| || ||| Sbjct 22655 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 22596 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || || || |||| || | || | || || || ||| Sbjct 22595 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22536 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 |||||||| ||||| || || ||| |||||||| Sbjct 22535 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTG 22503 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| ||||||||||| ||||||| | || ||||| | || Sbjct 22943 ATGCAGATTTTTGTTAAAACATTGACCGGCAAGACTATTACATTAGAGGTGGAGTCTTCT 22884 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || ||||| |||||||| || ||||| || ||| Sbjct 22883 GACACTATCGACAACGTAAAGTCGAAGATCCAAGATAAAGAAGGTATCCCACCTGACCAA 22824 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || || || |||| || | || | || || || ||| Sbjct 22823 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22764 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 |||||||| ||||| || || ||| |||||||| Sbjct 22763 ATTCAAAAAGAGTCAACTTTGCATCTGGTTTTG 22731 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||| || || ||| ||||||| ||||| || ||| | || Sbjct 22487 ATGCAGATTTTTGTTAAGACTCTTACTGGTAAGACTATTACACTTGAGGTTGAATCCTCT 22428 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || || || |||||||| || ||||| || ||| Sbjct 22427 GACACTATCGACAACGTAAAGTCGAAGATCCAGGATAAAGAAGGTATCCCACCTGACCAA 22368 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || || || |||| || | || | || || || ||| Sbjct 22367 CAAAGATTGATCTTTGCAGGTAAGCAGCTGGAGGATGGAAGAACTCTATCTGACTATAAC 22308 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 |||||||| ||||| || || ||| |||||||| Sbjct 22307 ATTCAAAAAGAGTCAACATTGCATCTGGTTTTG 22275 >seq40 Length=692676 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| || ||| ||||||| |||||||| || | || Sbjct 222195 ATGCAGATTTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTTGAAGTCGAGTCTTCT 222254 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| ||| ||||||||||| ||||| || ||||| ||||| Sbjct 222255 GACACTATCGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAG 222314 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || |||||||| || | ||| | || || || ||| Sbjct 222315 CAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTATAAC 222374 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| ||||| || ||||| || ||||| | | ||| | ||||| Sbjct 222375 ATTCAGAAGGAATCTACCTTGCACTTGGTGCTTAGATTGAGAGGTGG 222421 >seq34 Length=390617 Score = 111 bits (122), Expect = 1e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 || || || ||| |||| || ||| | || ||| | || || ||| | |||||| | ||| Sbjct 329740 TTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAATCCTCCGACACTATT 329681 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | ||||| || ||||||||||| || || || ||||| || || ||| | || Sbjct 329680 GACAATGTCAAGTCTAAGATTCAAGACAAGGAGGGTATTCCACCTGACCAGCAGAGATTG 329621 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | ||| || || || ||||| || | || | || || |||||||| |||||| Sbjct 329620 ATTTTCGCTGGTAAGCAGTTGGAGGATGGCAGAACTTTGTCTGACTACAACATCCAAAAG 329561 Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || ||||| ||| | ||| | ||||| || Sbjct 329560 GAATCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGGTAT 329520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917829169600