Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq70 178 3e-39 seq34 116 9e-21 seq40 111 4e-19 >seq70 Length=181133 Score = 178 bits (196), Expect = 3e-39 Identities = 169/216 (78%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 |||||| ||||| || || || ||||||||||| ||||| || || | ||| || ||||| Sbjct 22044 TCTTAGCACAAGATGTAGGGTCGACTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCC 22103 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||| ||||| ||||| ||||| ||||| | | |||||||| || |||| || ||||| Sbjct 22104 ATCCTCCAGTTGCTTACCTGCAAAGATCAATCTCTGTTGGTCGGGCGGAATGCCCTCCTT 22163 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||| ||||| ||| || || || ||||| |||||| |||||| ||||| || || Sbjct 22164 GTCCTGAATCTTGGATTTGACATTGTCAATGGTATCAGAGGATTCAACTTCGAGTGTAAT 22223 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || |||||||| ||||| | |||||| Sbjct 22224 AGTCTTACCGGTAAGAGTCTTAACAAAAATCTGCAT 22259 Score = 178 bits (196), Expect = 3e-39 Identities = 170/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| | || || || | || ||||||||||| |||||||| || | || || ||| Sbjct 22270 AGTCTCAAAACCAGATGCAATGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTT 22329 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| ||||||||||| ||||| ||||| | | |||||||||||| || | ||||| Sbjct 22330 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCT 22389 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || ||||||||||| || ||||| ||||| ||||||||| ||||||||| || || Sbjct 22390 TTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGTA 22449 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || |||||||| ||||| | |||||| Sbjct 22450 ATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 22487 Score = 178 bits (196), Expect = 3e-39 Identities = 170/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| | || || || | ||| ||||||||||| |||||||| || | || || ||| Sbjct 22498 AGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTT 22557 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| ||||||||||| ||||| ||||| | | |||||||||||| || | ||||| Sbjct 22558 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCT 22617 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || || |||||||| || ||||| ||||| ||||||||| ||||||||| || || Sbjct 22618 TTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGTA 22677 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || |||||||| ||||| | |||||| Sbjct 22678 ATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCAT 22715 Score = 156 bits (172), Expect = 1e-32 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || ||||| ||||| || || |||||||| || ||||| | | || || ||||| ||| Sbjct 22963 ACGAGGTGTAGAGTTGATTCCTTTTGGATATTGTAATCAGATAAAGTTCTGCCATCCTCC 23022 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 | |||||| ||||||||||| | | ||| || ||||| || | ||||| || |||||| Sbjct 23023 AACTGCTTACCTGCGAAGATCAATCTTTGCTGATCAGGTGGGATGCCTTCTTTATCCTGG 23082 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| || ||||| ||||| ||||||||| ||| ||||| || || || ||||| Sbjct 23083 ATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCGACCTCAAGTGTAATAGTCTTA 23142 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || |||||||| ||||| | |||||| Sbjct 23143 CCAGTAAGAGTCTTAACAAAAATCTGCAT 23171 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| | || || || | ||| ||||||||||| |||||||| || | || || ||| Sbjct 22726 AGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTT 22785 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| ||||||||||| ||||| ||||| | | |||||||||||| || | ||||| Sbjct 22786 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCT 22845 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || || |||||||| || ||||| ||||| |||||||| || ||||| | || Sbjct 22846 TTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACCTCTAATGTA 22905 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || | || || ||||| | |||||| Sbjct 22906 ATAGTCTTGCCGGTCAATGTTTTAACAAAAATCTGCAT 22943 >seq34 Length=390617 Score = 116 bits (128), Expect = 9e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||| | ||||| || ||||||||||| || || | | || || || Sbjct 329534 TCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 329593 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||| |||| |||||| || ||||| || | | || |||||||| |||| || ||||| Sbjct 329594 ATCCTCCAACTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGGAATACCCTCCTT 329653 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || ||||| || || || || || ||||| ||| ||| ||||| | |||||| Sbjct 329654 GTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCGGAGGATTCGACCTCCAAAGTGAT 329713 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| || || | |||||| || || Sbjct 329714 GGTCTTACCAGTCAAAGTCTTGACGAA 329740 >seq40 Length=692676 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | ||| | || || || || || |||||||| || | | ||| || || Sbjct 222410 TCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGACAAGGTTCTGCC 222351 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||| |||| ||||| || || ||||| | | || || ||||| |||| |||||||| Sbjct 222350 ATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGAATACCTTCCTT 222291 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || |||||| || || || ||||| |||||||| || || || || || || Sbjct 222290 GTCTTGAATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGGGTAAT 222231 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| ||||| | ||||| || || | |||||| || Sbjct 222230 AGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCATCTT 222192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150440578325