Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq34 158 3e-33 seq70 141 2e-28 seq40 120 7e-22 seq33 86.0 1e-11 >seq34 Length=390617 Score = 158 bits (174), Expect = 3e-33 Identities = 159/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | ||| | |||||||| ||||||| ||||| || | ||||||||| || Sbjct 329534 TCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 329593 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || | |||||| |||||||| || | || || ||||| || |||||||| ||||| Sbjct 329594 ATCCTCCAACTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGGAATACCCTCCTT 329653 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| ||||| ||| ||| || || ||||| |||| ||| || || || ||||| Sbjct 329654 GTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCGGAGGATTCGACCTCCAAAGTGAT 329713 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAA 225704 ||||| || |||||||| || | ||| Sbjct 329714 GGTCTTACCAGTCAAAGTCTTGACGAA 329740 >seq70 Length=181133 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||||| || || || | ||| || |||||||| | || || || | | |||||| Sbjct 22726 AGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTT 22785 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || |||||||| || || ||||| | || ||||||||| || || |||||||| Sbjct 22786 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCT 22845 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 || ||||||||||| ||| || ||||| ||||| || | ||||| ||||| || Sbjct 22846 TTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACCTCTAATGTA 22905 Query 225676 ATCGTCTTGCCCGTCAAAGTTTT 225698 || |||||||| ||||| ||||| Sbjct 22906 ATAGTCTTGCCGGTCAATGTTTT 22928 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||||| || || || | ||| || |||||||| | || || || | | |||||| Sbjct 22498 AGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTTCTT 22557 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || |||||||| || || ||||| | || ||||||||| || || |||||||| Sbjct 22558 CCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCT 22617 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 || ||||||||||| ||| || ||||| ||||| |||| ||| || || | || Sbjct 22618 TTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGTGTA 22677 Query 225676 ATCGTCTTGCCCGTCAAAGTTTT 225698 || ||||| || || | ||| || Sbjct 22678 ATAGTCTTACCAGTAAGAGTCTT 22700 Score = 120 bits (132), Expect = 7e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || ||||| || || || || |||||||| | ||||| || | | |||||| || Sbjct 22044 TCTTAGCACAAGATGTAGGGTCGACTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCC 22103 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || || ||||| || || ||||| | || ||||||||||||||||| || ||||| Sbjct 22104 ATCCTCCAGTTGCTTACCTGCAAAGATCAATCTCTGTTGGTCGGGCGGAATGCCCTCCTT 22163 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| || ||||| || ||| || ||||| || |||| ||| || || | || || Sbjct 22164 GTCCTGAATCTTGGATTTGACATTGTCAATGGTATCAGAGGATTCAACTTCGAGTGTAAT 22223 Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698 ||||| || || | ||| || Sbjct 22224 AGTCTTACCGGTAAGAGTCTT 22244 >seq40 Length=692676 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | ||| | || ||||| || || | || || || | ||| ||||| || Sbjct 222410 TCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGACAAGGTTCTGCC 222351 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || | ||||| ||||| ||||| | || || || || || |||||||||||||| Sbjct 222350 ATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTGGAATACCTTCCTT 222291 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| |||||| ||| ||| ||||| ||||| || | || || || | || || Sbjct 222290 GTCTTGAATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGGGTAAT 222231 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||||||| || || | ||| | ||||| || Sbjct 222230 AGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCATCTT 222192 >seq33 Length=533711 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| |||||||||||||| || || || || || ||||| ||||||||||| |||||||| Sbjct 335534 GAAGATTTGACCATCAGTGATGGAAATGACGTTAGTAGGAATATAAGCAGACACATCACC 335593 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574 | || || |||| || ||| ||||| || | || || ||||| Sbjct 335594 ACCCTGGGTCTCGATAATAGGCAAGGCGGTCAAAGAACCCCCACC 335638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192529595672870