Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq70 125 2e-23 >seq70 Length=181133 Score = 125 bits (138), Expect = 2e-23 Identities = 167/231 (72%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| || |||||||| || || ||||||||||| |||||||| || | | |||||| || Sbjct 22044 TCTTAGCACAAGATGTAGGGTCGACTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCTTCC 22103 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||| || || || || || ||||| | ||||| ||||| | || || || ||||| Sbjct 22104 ATCCTCCAGTTGCTTACCTGCAAAGATCAATCTCTGTTGGTCGGGCGGAATGCCCTCCTT 22163 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || ||||| || ||||||| | || | | | || || || ||||| || ||||| Sbjct 22164 GTCCTGAATCTTGGATTTGACATTGTCAATGGTATCAGAGGATTCAACTTCGAGTGTAAT 22223 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 ||| || || || |||||||| || || | |||||| ||| |||| ||| Sbjct 22224 AGTCTTACCGGTAAGAGTCTTAACAAAAATCTGCATACCACCTCTTAGTCT 22274 Score = 102 bits (112), Expect = 2e-16 Identities = 165/236 (70%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| | || ||||| | ||| ||||||||||| ||||| || || | || |||| Sbjct 22495 CTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTT 22554 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || ||||| || || || || || ||||| | || || ||||| | | ||| ||| Sbjct 22555 CTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCT 22614 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || ||||| || || || || | || | |||| || || || ||||| Sbjct 22615 TCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGT 22674 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 |||||||| || || || |||||||| || || | |||||| ||| |||| ||| Sbjct 22675 GTAATAGTCTTACCAGTAAGAGTCTTAACAAATATCTGCATACCACCTCTTAGTCT 22730 Score = 93.3 bits (102), Expect = 1e-13 Identities = 163/236 (69%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| | || ||||| | || ||||||||||| ||||| || || | || |||| Sbjct 22267 CTTAGTCTCAAAACCAGATGCAATGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTT 22326 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || ||||| || || || || || ||||| | || || ||||| | | ||| ||| Sbjct 22327 CTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCT 22386 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || || || || || || || | || | |||| || || || ||||| Sbjct 22387 TCTTTATCCTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAGGATTCAACCTCAAGT 22446 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 |||||||| || || || |||||||| || || | |||||| ||| |||| ||| Sbjct 22447 GTAATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCATACCACCTCTTAGTCT 22502 Score = 93.3 bits (102), Expect = 1e-13 Identities = 163/236 (69%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| | || ||||| | ||| ||||||||||| ||||| || || | || |||| Sbjct 22723 CTTAGTCTCAAAACCAGATGCAAAGTTGACTCTTTTTGAATGTTATAGTCAGATAGAGTT 22782 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || ||||| || || || || || ||||| | || || ||||| | | ||| ||| Sbjct 22783 CTTCCATCCTCCAGCTGCTTACCTGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCT 22842 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || ||||| || || || || | || | |||| ||| ||| || || | Sbjct 22843 TCTTTATCTTGGATCTTCGACTTTACGTTGTCGATAGTGTCAGAAGACTCCACCTCTAAT 22902 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 |||||||| ||||| || | || || || || | |||||| ||| |||| ||| Sbjct 22903 GTAATAGTCTTGCCGGTCAATGTTTTAACAAAAATCTGCATACCACCTCTTAATCT 22958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153819247750455