Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq4 145 6e-30 seq10 129 4e-25 >seq4 Length=1091360 Score = 145 bits (160), Expect = 6e-30 Identities = 428/655 (65%), Gaps = 25/655 (4%) Strand=Plus/Minus Query 101708 TGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATC 101767 || ||||| || ||||| |||||||| || || ||| | | | ||||||||| ||| Sbjct 134263 TGCGCATCACCCATAGTGTGGATAAATTCGCCTGGCTCCATGCCACAGACATGAGCTATC 134204 Query 101768 ATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCT 101827 || | || || | || || ||||| |||||||| || |||| ||||| || | Sbjct 134203 ATTCGGGTCAATAAAGCGTAAGATGCAATATTAAATGGGACGCCTAGTCCCATGTCGCAT 134144 Query 101828 GATCTTTGATACAGTTGACAGGAAAGCTTT------CCATCAC------AG---ACATAA 101872 ||||||||||| | || ||||| ||| || || || |||||| Sbjct 134143 GATCTTTGATATAACAAGCATGAAAGTTTTGGTTTCCCTTCCTTTGGGAAGCTAACATAA 134084 Query 101873 AATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAA 101932 ||||| |||||||| ||||||||||| |||| ||||| |||| ||||||| Sbjct 134083 AATTGTGAAAATACATGGCAAGGCGGCAATGCCATGAGAGGAAAATCTGGTGGATTCCAA 134024 Query 101933 GCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTT 101992 || | ||| | || | | ||| ||| || ||||| | ||| ||||| | || Sbjct 134023 GCGCTCATAATAATTCGCCGATCATAAGGATTCGTTTTCAATTTATGAATCACATCTTGC 133964 Query 101993 AATTGGTCAACTCCTTCTCCTTTATAATCG-CG-CCCAACACCTTTATATTCTGCTCCGA 102050 | ||| |||| || | ||| |||||||| || | ||| | || |||| ||| |||| Sbjct 133963 AGTTGATCAAAACCGTGCCCTGTATAATCGTCGTCACAAGTC--TTGTATTTTGCACCGA 133906 Query 102051 AATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAAC 102110 | || ||||| || || ||||| || ||||| | ||| |||||| || | || | Sbjct 133905 AGTGTCTCCATTGGAACCCATAAACGGGTCCTAAATCACCTTCACGCCTACTACTCAATC 133846 Query 102111 CAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTG 102170 ||| |||||| | || ||| || ||||| | |||||||| | || || | | | Sbjct 133845 CAATTTTATCCAGGTATTCTCTTGAACCATTGCCCTCCCAAATCTTGACTCCCTGTTCAG 133786 Query 102171 ATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTC 102230 | | | || | || || | || || ||||| | ||||| | | |||| Sbjct 133785 ACAATTTCTTACCATCTGTGCAACCCGAAATGAACCATAGAAGTTCCAGTATTATACCTT 133726 Query 102231 TCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA---TTCATTTTCTAAACTAAACCTAG 102287 || ||||||||| || ||||| | || ||||| | ||||| ||| | || || Sbjct 133725 TCGTAAATACTCTTTTTGTAGTCAGCAGCGGAAAGGTGTTATTTTGCAAATTGAATCTCA 133666 Query 102288 ACTGT---GTTCCAAAAATACTCAGTGTTCCAGTCCCTGTTCTGTCATTTTTAAA 102339 ||||| | |||| ||||| | ||| || || ||||| || ||| | |||| Sbjct 133665 ACTGTGGAGGAGCAAAGATACTAAATGTGCCTGTTCCTGTCCTATCAGGTCTAAA 133611 >seq10 Length=1751495 Score = 129 bits (142), Expect = 4e-25 Identities = 449/687 (65%), Gaps = 39/687 (6%) Strand=Plus/Plus Query 101684 GCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGC 101743 ||||| | |||||| || | || || || || ||||| || ||||| || || ||| Sbjct 1649258 GCATCTACGTGATCCTTGTACACATGCGCGTCACCCATAGTGTGAATAAATTCGCCTGGC 1649317 Query 101744 ACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAAT 101803 | | | | ||||||||| ||||| | || || | || || ||||| |||||| Sbjct 1649318 TCCATGTCACAGACATGAGCTATCATTCGGGTCAATAAAGCGTAAGATGCAATATTAAAT 1649377 Query 101804 GGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTT------ 101857 || || |||| ||||| || |||||||||||| | || ||||| ||| Sbjct 1649378 GGGACGCCTAGTCCCATGTCGCATGATCTTTGATATAACAAGCATGAAAGTTTTGGTTTC 1649437 Query 101858 CCATCAC------AG---ACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATT 101908 || || || ||||||||||| || ||||| || |||||||| |||| Sbjct 1649438 CCTTCCTTTGGGAAGCTAACATAAAATTGTGAAAACACATGGCATGGCGGCAATGCCATG 1649497 Query 101909 TTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTT 101968 |||| |||| ||||||||| | ||| | || | ||||| ||| || ||| Sbjct 1649498 AGCGGAAAATCTGGTGGATTCCAAGCGCTCATAATAATTCGCCTATCATAAGGATTCGTT 1649557 Query 101969 TTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCG-CG-CC 102026 || | | | ||||| | || | ||| |||| || | ||| |||||||| || | Sbjct 1649558 TTCAATTTGTGAATCACATCTTGCAGTTGATCAAAACCATGCCCTGTATAATCGTCGTCA 1649617 Query 102027 CAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGAT 102086 ||| | || |||| ||| ||||| || ||||| || || ||||| || ||||| | || Sbjct 1649618 CAAGTC--TTGTATTTTGCACCGAAGTGTCTCCATTGGAACCCATAAACGGGTCCTAAAT 1649675 Query 102087 CTCCTTCA--TCT-CTG-TCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTC 102142 | |||||| || ||| || || |||| |||||| | || ||| || ||||| Sbjct 1649676 CACCTTCACGCCTACTGCTC----AATCCAATTTTATCCAGGTATTCTCTTGAACCATTG 1649731 Query 102143 GCATCCCAAATGTGCACGCCAGCTGCTGA-TAGCTCTTTGCTGTCAGTAGATCCTCTGAT 102201 | |||||||| | || || | | || | ||| || | || || | || || Sbjct 1649732 CCCTCCCAAATTTTGACTCCCTGTTCAGACAATCTC-TTACCATCTGTGCAACCCGAAAT 1649790 Query 102202 AAACCACAACAGTTCTTCAACA--ACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGT 102259 ||||| | || || ||| | | |||| || ||||||| | || ||||| | || Sbjct 1649791 GAACCATAGAAG--CTCCAATATTATACCTTTCGTAAATACTTTTTTTGTAGTCAGCAGC 1649848 Query 102260 GGAAA---TTCATTTTCTAAACTAAACCTAGACTGT---GTTCCAAAAATACTCAGTGTT 102313 ||||| ||||||| ||| | || || ||||| | |||| ||||| | |||| Sbjct 1649849 GGAAAGGTGTCATTTTGCAAATTGAATCTCAACTGTGGAGGAGCAAAGATACTAAATGTT 1649908 Query 102314 CCAGTCCCTGTTCTGTCATTTTTAAAT 102340 || || ||||| || ||| | ||||| Sbjct 1649909 CCTGTTCCTGTCCTATCAGGTCTAAAT 1649935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251120750518