Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq10 95.1 1e-14 seq4 86.0 5e-12 seq14 84.2 2e-11 seq9 84.2 2e-11 >seq10 Length=1751495 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || ||||| || ||| |||| || |||||||| || || |||||| ||| || | Sbjct 575419 AAGATGCAGATTTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTTGAAGTCGAGTCT 575360 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | | || | ||| ||| ||| || || |||||| | || ||| Sbjct 575359 TCTGACACTATCGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCTGAT 575300 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 || || ||| | |||||||| || || ||| |||| ||| || ||| || | || || Sbjct 575299 CAGCAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTAT 575240 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || ||||||||||||||||| | ||| ||||| | |||| |||| || Sbjct 575239 AACATTCAGAAGGAATCTACCTTGCACTTGGTGCTTAGATTGAGAGGTGG 575190 >seq4 Length=1091360 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || ||||| || ||| |||| || |||||||| || || |||||| |||| || | Sbjct 719947 AAGATGCAGATTTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTCGAAGTCGAGTCT 719888 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | | || ||||| || ||| || || |||||| | || || Sbjct 719887 TCTGACACTATCGACAATGTTAAGTCCAAGATTCAAGACAAGGAAGGTATCCCACCTGAC 719828 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 || || ||| | ||||| || || || ||| |||| ||| || ||| || | || || Sbjct 719827 CAGCAGAGATTGATCTTCGCTGGTAAGCAATTGGAGGATGGCAGAACGTTGTCTGACTAT 719768 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || ||||||||||| ||| | ||| ||||| | |||| |||| || Sbjct 719767 AACATCCAGAAGGAATCCACTTTGCACTTGGTGCTTAGATTGAGAGGTGG 719718 >seq14 Length=1283838 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 |||||||||||| | || ||||| ||||| | |||||||| || ||||| | || Sbjct 778607 GATAAAGAAGGTATCCCACCTGATCAGCAAAGGTTAATCTTTGCAGGAAAACAGTTAGAG 778666 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| || |||| || | ||||||||||| || || ||||| || || || |||| || Sbjct 778667 GATGGCAGAACTTTGTCTGATTACAATATCCAAAAAGAATCAACCCTGCATCTGGTTTTG 778726 Query 29175 CGATTACGAGGAGG 29188 ||||| |||| || Sbjct 778727 AGATTAAGAGGTGG 778740 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 |||||||||||| | || || ||||| ||||| ||||| || || || || ||||| Sbjct 778835 GATAAAGAAGGTATTCCACCTGACCAACAGAGACTGATCTTCGCAGGTAAGCAGCTGGAG 778894 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | |||| | | || ||||| ||||| || |||||||| || ||| |||| || Sbjct 778895 GATGGAAGAACTCTTTCTGACTACAACATTCAAAAAGAATCTACCCTGCACCTGGTTTTG 778954 Query 29175 CGATTACGAGGAGG 29188 ||||| |||| || Sbjct 778955 AGATTAAGAGGTGG 778968 >seq9 Length=2005801 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||||||||| | || ||||| |||||| | ||||| || || || || |||| Sbjct 503440 GATAAAGAAGGCATCCCACCTGATCAGCAAAGATTGATCTTCGCAGGTAAGCAGTTGGAG 503381 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| || |||| | | ||||||||||| || |||||||| ||||| ||| | || || Sbjct 503380 GATGGCAGAACTTTATCTGATTACAATATCCAAAAGGAATCAACTCTACACCTCGTTTTG 503321 Query 29175 CGATTACGAGGAGG 29188 ||||| |||| || Sbjct 503320 AGATTAAGAGGTGG 503307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428335906033790