Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq10 100 2e-16 seq14 93.3 3e-14 seq9 93.3 3e-14 >seq10 Length=1751495 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 || ||||| || ||| |||| || |||||||| || || |||||| ||| || | Sbjct 575419 AAGATGCAGATTTTCGTCAAGACCTTGACGGGTAAGACTATTACCCTTGAAGTCGAGTCT 575360 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || || | | | || ||||| ||| ||| || || |||||| | || ||| Sbjct 575359 TCTGACACTATCGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCTGAT 575300 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 || || ||| | |||||||| || || |||||||| ||| || ||| || | || || Sbjct 575299 CAGCAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGCAGAACCTTGTCTGACTAT 575240 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || ||||| ||||||||||| | ||| ||||| | |||| |||| || Sbjct 575239 AACATTCAGAAGGAATCTACCTTGCACTTGGTGCTTAGATTGAGAGGTGG 575190 >seq14 Length=1283838 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 |||||||||||| | || ||||| ||||| | |||||||| || ||||| || || Sbjct 778607 GATAAAGAAGGTATCCCACCTGATCAGCAAAGGTTAATCTTTGCAGGAAAACAGTTAGAG 778666 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247 ||| || |||| || | ||||||||||| ||||| ||||| || || || |||| || Sbjct 778667 GATGGCAGAACTTTGTCTGATTACAATATCCAAAAAGAATCAACCCTGCATCTGGTTTTG 778726 Query 25248 CGATTACGAGGAGG 25261 ||||| |||| || Sbjct 778727 AGATTAAGAGGTGG 778740 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 |||||||||||| | || || ||||| ||||| ||||| || || || || |||| Sbjct 778835 GATAAAGAAGGTATTCCACCTGACCAACAGAGACTGATCTTCGCAGGTAAGCAGCTGGAG 778894 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247 ||| | |||| | | || ||||| |||||||| |||||||| || ||| |||| || Sbjct 778895 GATGGAAGAACTCTTTCTGACTACAACATTCAAAAAGAATCTACCCTGCACCTGGTTTTG 778954 Query 25248 CGATTACGAGGAGG 25261 ||||| |||| || Sbjct 778955 AGATTAAGAGGTGG 778968 >seq9 Length=2005801 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 ||||||||||| | || ||||| |||||| | ||||| || || || || ||||| Sbjct 503440 GATAAAGAAGGCATCCCACCTGATCAGCAAAGATTGATCTTCGCAGGTAAGCAGTTGGAG 503381 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247 ||| || |||| | | ||||||||||| ||||||||||| ||||| ||| | || || Sbjct 503380 GATGGCAGAACTTTATCTGATTACAATATCCAAAAGGAATCAACTCTACACCTCGTTTTG 503321 Query 25248 CGATTACGAGGAGG 25261 ||||| |||| || Sbjct 503320 AGATTAAGAGGTGG 503307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410796709881452