Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq14 98.7 1e-15 seq6 95.1 1e-14 seq13 89.7 6e-13 >seq14 Length=1283838 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||||||| | ||| |||| |||| || || |||||||| || || |||| Sbjct 779196 CCACCTCTTAATCTCAAAACCAGGTGCAGGGTAGATTCTTTTTGAATGTTATAGTCAGAA 779137 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| | | || || |||||||||||||| || || | || ||| ||||||| ||| Sbjct 779136 AGAGTTCTTCCATCCTCCAGCTGCTTACCAGCAAAGATCAATCTCTGTTGGTCGGGCGGA 779077 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135 | || |||||||||| ||| | || | | ||| | | | ||||| ||||| || Sbjct 779076 ATGCCCTCCTTGTCC-TGAATCTTCGACTTCACGTTGTCGATTGTGTCAGAGGATTCAAC 779018 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | || || || || || || || ||||| ||||| || ||||| Sbjct 779017 CTCAAGTGTTATAGTCTTACCAGTAAGAGTCTTAACAAAAATCTGCAT 778970 >seq6 Length=1007293 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| || | ||| ||||| ||||| ||| |||||||| || ||||| |||| | Sbjct 101413 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 101354 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||| | | || || | ||||||||||||||| || | || ||||||||| | || Sbjct 101353 AAAGTTCTGCCATCCTCCAACTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGGA 101294 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | |||||||| | ||| | || | |||| | | | |||||| ||||| || Sbjct 101293 ATACCCTCCTTGT-CTTGAATCTTAGACTTGACATTGTCAATAGTGTCGGAGGATTCGAC 101235 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAA 43174 || | |||||||| || || || | ||||| || || Sbjct 101234 CTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 101196 >seq13 Length=1315104 Score = 89.7 bits (98), Expect = 6e-13 Identities = 155/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| || | ||| ||||| ||||| ||| |||||||| || || || |||| | Sbjct 1189850 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTATAGTCAGAC 1189909 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||| | | || || | |||||||||||||| || | || ||||||||| | || Sbjct 1189910 AAAGTTCTGCCATCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTGGG 1189969 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 43134 | | |||||||| | ||| | || | |||| ||| | | | |||||| ||||| | Sbjct 1189970 ATACCCTCCTTGT-CTTGAATCTTAGACTTGA-CGTTGTCAATAGTGTCGGAAGATTCGA 1190027 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAA 43174 | || | |||||||| || || || | ||||| || || Sbjct 1190028 CCTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 1190067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817471341040