Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017
-03-16] 18 sequences; 20,864,403 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq12 210 2e-49
seq1 203 3e-47
>seq12
Length=1443312
Score = 210 bits (232), Expect = 2e-49
Identities = 489/729 (67%), Gaps = 14/729 (2%)
Strand=Plus/Plus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
||||| || || ||| |||||||||||||| || ||||||||| | | |||||||||
Sbjct 767387 TTTTGGTAATCCGAAACCCTCTTTTCAAAGAAGTTAGTTTTTCCTGCCAGCGAAATATTT 767446
Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAAT--AGTATTTATCGCATCCCAATTCCAACA 16061
|||||||| ||||| ||||| | |||| | ||||||| | | |||||| | ||
Sbjct 767447 TCCATAAAGTCAAACGGATTAGT--AACATTGAAGTATTTCTTGT-TCCCAAGAGCGACC 767503
Query 16062 ATAATC-TATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATT 16120
| | | | || || ||||| || | ||||| ||||| | | ||||| || |
Sbjct 767504 AGCAGCCTGTCTGCTACAAACTCAACGTACTGATTCATCAGCGCGGCATTCATGCCCAGC 767563
Query 16121 AATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATT 16180
| || |||| || || | ||| | |||| || || | || ||||| | ||
Sbjct 767564 AGAGCCACGGGGAGCGCGTCGATGAAATACCTTTTCTCGATCTCGACAGCTTCTGTAATG 767623
Query 16181 ATATCTCTTACTACACTATTTAACGGAGG---GTTTAATAAGTGTTTAAACATTATACAA 16237
|| ||| | | | ||| ||| |||| || || |||||||| ||||
Sbjct 767624 ATC---CTTTCAATAATATCAGGATCAGGCTTGTTTCTTAGATGGGAAAACATTAGACAA 767680
Query 16238 GCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCT 16297
||||| || ||||||||||| || |||| ||||||||||||||||| || || |||
Sbjct 767681 GCAAAGTCTGTGTGCAATCCTTCATCTCTACAGATTAACTCGTTTGAAAAGGTCAGGCCT 767740
Query 16298 GGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATA 16357
||||| || || ||||| | |||||| || |||||||| || || || || || |||
Sbjct 767741 GGCATGAGGCCCTTCTTTTTGAGCCAAAAGATGGCGGCAAAAGATCCCGAGAAAAAGATA 767800
Query 16358 CCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatc 16417
||||| |||||||||||||| |||| | |||| |||| ||| | | || |||
Sbjct 767801 CCTTCTACTGCGGCAAATGCCACCAGCCTCTCAGCGTAAAGAGCATTGTCATCTTGAATC 767860
Query 16418 cattttttagcccaatttg-ctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAA 16476
|| | ||||||| | | ||||| || | | || |||| ||| || ||||||||
Sbjct 767861 CACCTGATAGCCCACTCAGCCTTTTCCTTGATCTGAG-GGATGTGCTCAATCGCATTAAA 767919
Query 16477 TAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTC 16536
|| ||| ||| || ||| || || || || |||| ||| || | ||
Sbjct 767920 CAAGAAATCCCGTTCCTTAGGATCCTTGATGTATGTCTCGATTAATAATGAGTAAGTCTC 767979
Query 16537 TGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTG 16596
||||| ||||| ||||| ||||| || || || || ||| | || || | ||| ||
Sbjct 767980 CGAATGGATATTTTCCATCATGATCTGGAACCCGTAGAAACATTTGGCCTCTGGTATCTG 768039
Query 16597 TACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAA 16656
|| || | | |||| | || |||| || || || || ||||| || || |||||
Sbjct 768040 AACCTCTGCGGAAAAATTCTCAACTAAATTCTCATTGACAATTCCGTCAGATGCCGCAAA 768099
Query 16657 AAACGCAAG 16665
|| || ||
Sbjct 768100 GAAAGCTAG 768108
>seq1
Length=2110500
Score = 203 bits (224), Expect = 3e-47
Identities = 489/731 (67%), Gaps = 18/731 (2%)
Strand=Plus/Plus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
||||| || || ||| ||||| |||||||| || ||||||||| | | ||||||||
Sbjct 1033792 TTTTGGTAATCCGAAACCCTCTTCTCAAAGAAGTTAGTTTTTCCTGCCAGCGAAATATTC 1033851
Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAAT--AGTATTTATCGCATCCCAATTCCAACA 16061
|||||||||||||| ||||| | |||| | ||||||| | | |||| | | ||
Sbjct 1033852 TCCATAAAATCAAACGGATTAGT--AACATTGAAGTATTTCTTGTTCCCCAGAGCGACCA 1033909
Query 16062 ATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTA 16121
| || || || ||||| || | ||||| ||||| | | ||||| || | |
Sbjct 1033910 GCAGCCTGTCTGCTACAAACTCAACGTACTGATTCATCAGCGCGGCATTCATGCCCAGCA 1033969
Query 16122 ATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTA 16181
|| |||| ||| || | ||| | |||| || || | || ||||| | || |
Sbjct 1033970 GAGCCACGGGGAGTGCGTCAATGAAATATCTTTTCTCGATCTCGACAGCTTCTGTAATAA 1034029
Query 16182 TATCTCTTACTACACTATTTAACGG---AGGGTT--TAATAAG-TGTTTAAACATTATAC 16235
| ||| | | | ||| ||| ||| || | | || || |||||||| |
Sbjct 1034030 TC---CTTTCAATAATATC---CGGGTCAGGCTTGTTCCTTAGATGGGAAAACATTAGGC 1034083
Query 16236 AAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGAC 16295
||||||| || |||||||| || || |||| || |||||||||||||| || || |
Sbjct 1034084 AAGCAAAGTCTGTGTGCAATCCCTCATCTCTACAGATCAACTCGTTTGAAAAGGTCAGGC 1034143
Query 16296 CTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATA 16355
| ||||| || ||| ||||| | |||||| || |||||||| || || || || || |
Sbjct 1034144 CAGGCATGAGACCTTTCTTTTTGAGCCAAAAGATTGCGGCAAACGACCCCGAGAAAAAGA 1034203
Query 16356 TACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttcta 16415
||||||| |||||||||||||| ||||| | |||| |||| ||| | | || |
Sbjct 1034204 TACCTTCTACTGCGGCAAATGCCACCAACCTCTCAGCGTAAAGAGCATTGTCATCTTGAA 1034263
Query 16416 tccattttttagcccaatttg-ctttttgtttAACACAGTTCATGTTCTCTATTGCATTA 16474
|||| | | ||||| | | ||||| || | | || |||| || || ||||||
Sbjct 1034264 TCCACCTGATGGCCCACTCAGCCTTTTCCTTGATCTGAG-GGATGTGTTCAATGGCATTA 1034322
Query 16475 AATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATT 16534
|| || ||| ||| || ||| || || || || || ||||| || |
Sbjct 1034323 AACAAGAAATCCCGTTCCTTAGGATCCTTGATGTATGTCTCGATAAGTAATGAGTAAGTC 1034382
Query 16535 TCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATT 16594
|| ||||| ||||| ||||| |||||||| || || || ||| | || || | ||||
Sbjct 1034383 TCCGAATGGATATTTTCCATCATGATCTGAAACCCGTAGAAACATTTGGCCTCTGGTATT 1034442
Query 16595 TGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCA 16654
|| || || | | |||| | || ||||||| || || || ||||| || || |||
Sbjct 1034443 TGAACCTCTGCGGAAAAATTCTCAACTAAGTTCTCATTGACAATTCCGTCAGATGCGGCA 1034502
Query 16655 AAAAACGCAAG 16665
|| || || ||
Sbjct 1034503 AAGAAAGCTAG 1034513
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511895934800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |