Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq4 104 2e-17 seq10 95.1 1e-14 seq13 89.7 4e-13 seq6 87.8 1e-12 >seq4 Length=1091360 Score = 104 bits (114), Expect = 2e-17 Identities = 164/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||||||| | |||||||||| ||| |||||||| ||||| ||||| | Sbjct 719718 CCACCTCTCAATCTAAGCACCAAGTGCAAAGTGGATTCCTTCTGGATGTTATAGTCAGAC 719777 Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 | ||| | | || |||| ||| || || ||||| ||||| | ||| ||||| || | Sbjct 719778 AACGTT--CTGCCATCCTCCAATTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGTG 719835 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | ||| |||||||| ||| || |||||| | | |||| | ||| | Sbjct 719836 GGATACCTTCCTTGTCTTGAATCTTGGACTTAACATTGTCGATAGTGTCAGAAGACTCGA 719895 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 | || | |||||| ||||| ||||||| ||||| || || || ||||| ||| Sbjct 719896 CTTCGAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCATCTTG 719948 >seq10 Length=1751495 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||||||| | |||||||||| || |||||||||||||| ||||| | Sbjct 575190 CCACCTCTCAATCTAAGCACCAAGTGCAAGGTAGATTCCTTCTGAATGTTATAGTCAGAC 575249 Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 | ||| | | || |||| ||| || || || || ||||| | ||| || || || | Sbjct 575250 AAGGTT--CTGCCATCCTCCAATTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGTG 575307 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | ||| |||||||| ||| ||| ||| || | | |||| | ||| | Sbjct 575308 GAATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCGATAGTGTCAGAAGACTCGA 575367 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 | || | |||||| ||||| ||||||| ||||| || || || ||||| ||| Sbjct 575368 CTTCAAGGGTAATAGTCTTACCCGTCAAGGTCTTGACGAAAATCTGCATCTTG 575420 >seq13 Length=1315104 Score = 89.7 bits (98), Expect = 4e-13 Identities = 153/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||||||| || |||||||||| ||| ||||| || ||||| ||||| | Sbjct 1189850 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTATAGTCAGAC 1189909 Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 |||| | | || |||| ||| || || ||||| ||||| | ||| ||||| || | Sbjct 1189910 AAAGTT--CTGCCATCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTG 1189967 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | |||||||||||| ||| || ||| || | | |||| | || | Sbjct 1189968 GGATACCCTCCTTGTCTTGAATCTTAGACTTGACGTTGTCAATAGTGTCGGAAGATTCGA 1190027 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAA 45327 |||||| || || ||||| || |||| |||||| || || Sbjct 1190028 CCTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAA 1190067 >seq6 Length=1007293 Score = 87.8 bits (96), Expect = 1e-12 Identities = 102/136 (75%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||||||| || |||||||||| ||| ||||| || ||||||||||| | Sbjct 101413 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 101354 Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 |||| | | || |||| || || || ||||| ||||| | ||| ||||| || | Sbjct 101353 AAAGTT--CTGCCATCCTCCAACTGCTTACCAGCGAAAATCAATCTCTGCTGGTCAGGTG 101296 Query 45228 GCACACCCTCCTTGTC 45243 | | |||||||||||| Sbjct 101295 GAATACCCTCCTTGTC 101280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395075113330378