Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq10 109 7e-19 seq4 109 7e-19 >seq10 Length=1751495 Score = 109 bits (120), Expect = 7e-19 Identities = 246/356 (69%), Gaps = 18/356 (5%) Strand=Plus/Minus Query 104403 TGATTTAGGACCTATTTATGGTTTTCAGTGGAGACATTATGGTGAAAATTATA----TTG 104458 |||||||||||| ||||||| || || |||||||| | |||| ||| || | ||| Sbjct 1649677 TGATTTAGGACCCGTTTATGGGTTCCAATGGAGACACTTCGGTGCAAAATACAAGACTTG 1649618 Query 104459 GGTG--CGATAATAAATATGGTGGTATAGATCAACTCAAAAATATTATTACAACAATTCA 104516 | |||| ||| | |||| | |||||||| || || | ||| || |||| | Sbjct 1649617 TGACGACGATTATACAGGGCATGGTTTTGATCAACTGCAAGATGTGATT-CACAAATTGA 1649559 Query 104517 AAATGAA-CCTTGGGATAGAAGAATGATATTATTAGC--TTGGAACCCAAAGGATAATTC 104573 ||| ||| |||| ||||| |||| |||||| ||| |||||| ||| ||| | | Sbjct 1649558 AAACGAATCCTTATGATAGGCGAAT--TATTATGAGCGCTTGGAATCCACCAGATTTTCC 1649501 Query 104574 TAAAATGGCACTTCCTCCTTGTCAT-TGTATAGCACATTTTGATGTAAG-TTCAAAAATA 104631 |||||| | || || || ||| ||| | |||| ||| |||| || ||| ||| Sbjct 1649500 GCTCATGGCATTGCCGCCATGCCATGTGTTTT-CACAATTTTATGTTAGCTTCCCAAAGG 1649442 Query 104632 AATGGTAAAAGAGAATTGTCTTGTCATTTATTTCAAAGATC-TGCAGATATGGGGTTGGG 104690 || || ||| | || | || || |||| ||||||||| ||| || ||||| | || Sbjct 1649441 AAGGG-AAACCAAAACTTTCATGCTTGTTATATCAAAGATCATGC-GACATGGGACTAGG 1649384 Query 104691 AGTTCCTTTTAACATAGCAAGTTATGCATTATTAACACATATAATAGCTCATGTCT 104746 || || ||||| || ||| ||| || ||||| || | || ||||||||||||| Sbjct 1649383 CGTCCCATTTAATATTGCATCTTACGCTTTATTGACCCGAATGATAGCTCATGTCT 1649328 >seq4 Length=1091360 Score = 109 bits (120), Expect = 7e-19 Identities = 246/356 (69%), Gaps = 18/356 (5%) Strand=Plus/Plus Query 104403 TGATTTAGGACCTATTTATGGTTTTCAGTGGAGACATTATGGTGAAAATTATA----TTG 104458 |||||||||||| ||||||| || || |||||||| | |||| ||| || | ||| Sbjct 133868 TGATTTAGGACCCGTTTATGGGTTCCAATGGAGACACTTCGGTGCAAAATACAAGACTTG 133927 Query 104459 GGTG--CGATAATAAATATGGTGGTATAGATCAACTCAAAAATATTATTACAACAATTCA 104516 | |||| ||| | ||| | |||||||| || || | ||| || |||| | Sbjct 133928 TGACGACGATTATACAGGGCACGGTTTTGATCAACTGCAAGATGTGATT-CATAAATTGA 133986 Query 104517 AAATGAA-CCTTGGGATAGAAGAATGATATTATTAGC--TTGGAACCCAAAGGATAATTC 104573 ||| ||| |||| ||| | |||| |||||| ||| |||||| ||| ||| | | Sbjct 133987 AAACGAATCCTTATGATCGGCGAAT--TATTATGAGCGCTTGGAATCCACCAGATTTTCC 134044 Query 104574 TAAAATGGCACTTCCTCCTTGTCATTGTATAG-CACATTTTGATGTAAG-TTCAAAAATA 104631 | |||||| | || ||||| ||| |||| |||| ||| |||| || ||| ||| Sbjct 134045 TCTCATGGCATTGCCGCCTTGCCAT-GTATTTTCACAATTTTATGTTAGCTTCCCAAAGG 134103 Query 104632 AATGGTAAAAGAGAATTGTCTTGTCATTTATTTCAAAGATC-TGCAGATATGGGGTTGGG 104690 || || ||| | || | || || |||| ||||||||| ||| || ||||| | || Sbjct 134104 AAGGG-AAACCAAAACTTTCATGCTTGTTATATCAAAGATCATGC-GACATGGGACTAGG 134161 Query 104691 AGTTCCTTTTAACATAGCAAGTTATGCATTATTAACACATATAATAGCTCATGTCT 104746 || || ||||| || ||| ||| || ||||| || | || ||||||||||||| Sbjct 134162 CGTCCCATTTAATATTGCATCTTACGCTTTATTGACCCGAATGATAGCTCATGTCT 134217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679814247041760